Gene Plim_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3345 
Symbol 
ID9140061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4328500 
End bp4329558 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content58% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003631357 
Protein GI296123579 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTCC CAGCGTCTAT TTATCGTCGA GGTTTCACGC TCATTGAGTT GCTGGTGGTC 
ATCGCCATCA TCGCCATCCT GATTGCACTG CTTCTCCCCG CCGTTCAACA AGCCCGGGAA
GCAGCACGGC GGACACAGTG CCGCAACAAC CTCAAGCAGT TAGGTCTTGC CTTCCACAAC
TACCACGATG TCCACAACCA GTTTGCCTTG TCACAACTGG GGCCTACGAC GACTGGTAAC
GAAGACTGGC GCGGGAACGG CCCACATGTT GGCATCCTGC CCTTCATTGA TCAAACTCCG
CTCTACAACA CCTACAACTT CAATGCCAAT GCCTGGTGGA GTACCTCAGC TTCCGGCCAA
GCCCACAATG TCTCCGCTGG TAACAGCCCC GGACGTCAGG CCATAGCTGG CTACCGTTGC
CCGTCGGATC CCGCCGTTAA GTCCGATGGC ACAGGTCGCC GCCCGGGAAA CAACTATCCC
GTTTGTCAGG GGGCTAACGC CGGCATGTTC AACGATGGTG TCGCTGGTGG CTACAACGCC
TCGAAAACCA ACGGGATGTT CAACATGCGT GTGCCCGTCA CCATGGCGAG TGTCACCGAT
GGCACATCGA ATACCATCCT GGCTGGTGAA CAGGCTCTTT CTGGAGGCAG CGGAACGATT
GGAACACTGG CGAACCTCCG TCAGGCAATT GCTATTCCTT CGGGATGGGA CGGAACATTC
CTCACACAGG CTCAGGTCGA TGACTGGGGC AGTCGAGCAG CGGCTGCAAC AAGCAACATC
CGCTCAGAAA CGGGAGACTT CTGGAACGCT GGTGTGCATG AACAAGGGAC ATTCAATACT
CTGTTCCCCC CGAACTCTCG TTATCCGAAC GTGACGGCAC ACTGCGCTGG CTGCGCTCCC
GATGGCCCCG CCTCGGTCCC AGCTCGCAGC TATCACACAG GTGGCGTGCA TGTGCTGCTG
GCTGATGGCA CTGTTCGATT TGTCAGCGAC AACATCGACC TGACCACCTG GCAGCGACTG
GGCGCCCGTA ATGATGGCCA GCAACTTGGT GAGTTCTAA
 
Protein sequence
MRFPASIYRR GFTLIELLVV IAIIAILIAL LLPAVQQARE AARRTQCRNN LKQLGLAFHN 
YHDVHNQFAL SQLGPTTTGN EDWRGNGPHV GILPFIDQTP LYNTYNFNAN AWWSTSASGQ
AHNVSAGNSP GRQAIAGYRC PSDPAVKSDG TGRRPGNNYP VCQGANAGMF NDGVAGGYNA
SKTNGMFNMR VPVTMASVTD GTSNTILAGE QALSGGSGTI GTLANLRQAI AIPSGWDGTF
LTQAQVDDWG SRAAAATSNI RSETGDFWNA GVHEQGTFNT LFPPNSRYPN VTAHCAGCAP
DGPASVPARS YHTGGVHVLL ADGTVRFVSD NIDLTTWQRL GARNDGQQLG EF