Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3343 |
Symbol | |
ID | 9140059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4326857 |
End bp | 4327873 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | Glutamate--tRNA ligase |
Protein accession | YP_003631355 |
Protein GI | 296123577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.533309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAG GTCGACTCGC ACCATCACCC ACCGGGGCAC AACATCCGGG GAATGCCCGC ACCTTTCTGG TGGCGTGGCT GGCGGCGCGA TCGACAGGTT CGCGGTTGAT TCTCCGGATT GAGGATCTCG ATTCACCCAG AGTCAAGCCC TGGGCCATGA CACAGGCGGT TGAGGATCTG GCGTGGCTGG GGCTGGATTG GGACGAGGGG CCCAACACCC AACTTTCTGC GAGCGATCCG AACAGCGGCA AGACATCGAA CTGGTTTGAT GATCCCGCTT CGAACGGCTT TGTGCAGTCG CGGCGACTGG CTCGATATGC GGAAATTTTC CACGCCTTGC GGGATGCCGA ATGGGTTTAT CCTTGTACTT GCAGAAGGGC TGACGTGAGC CAGGCCGCCA GTGCGCCCCA TCAGGGGCAC GAGCCCGCGA TTTATCCGGG AACATGCAGG CATCGCCAAG CGGCTGATGC CGATCAACTG GCTGAGGGTT CCTACTGCTG GAGATTTCGC ACGGCAGGCT TTACTGAGCT CATGGGCTGG AAGGATCGAA TTGCCGGTGA GCAGAGTGCC ATGCTTCCAT ACGCTCTGGG CGACTTTGTA ATTGCCAAAG CGGATGGAAC TCCTGCGTAT CAACTGGCCG TCGTAGTCGA TGATCACGAC ATGGAGGTGA GAGAAGTGGT GCGGGGTGAT GACCTGATCC CGAGCACTTA TCGGCAACTG GCTTTGTATC AGGTGCTGGG ATGGTCTGCG CCAGAGTTCG CCCATGTGCC GCTGGTAAAA GGGCCTGATG GTTTAAGACT GGCCAAGCGG CACGGCGATT CGCGACTGTC AATCTTGCGG GAAGCGGATG TGGACTCTCG CGTGGTGATG GGCTGGTTGG CCTGTTCACT GGGACTCAGA GAGAACGACG CCCCGATTTC TCCTGCAGAG CTGATTGCTG ATTTCGCCTG GGACAAGATT CCCAAACACC CAGTCACCTT CCCGAGAGAA ATCTGGGATC AATGGTTGGG AAGATGA
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Protein sequence | MATGRLAPSP TGAQHPGNAR TFLVAWLAAR STGSRLILRI EDLDSPRVKP WAMTQAVEDL AWLGLDWDEG PNTQLSASDP NSGKTSNWFD DPASNGFVQS RRLARYAEIF HALRDAEWVY PCTCRRADVS QAASAPHQGH EPAIYPGTCR HRQAADADQL AEGSYCWRFR TAGFTELMGW KDRIAGEQSA MLPYALGDFV IAKADGTPAY QLAVVVDDHD MEVREVVRGD DLIPSTYRQL ALYQVLGWSA PEFAHVPLVK GPDGLRLAKR HGDSRLSILR EADVDSRVVM GWLACSLGLR ENDAPISPAE LIADFAWDKI PKHPVTFPRE IWDQWLGR
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