Gene Plim_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3338 
Symbol 
ID9140054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4319403 
End bp4320011 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content53% 
IMG OID 
ProductEndopeptidase Clp 
Protein accessionYP_003631350 
Protein GI296123572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATC TGGTTCCTTA CGTCATCGAG AAGAACGGTC GCGACGAACG GGCGATGGAT 
ATCTATAGCC GTCTGCTCCG CGACCGCATC ATTATTCTCG GCAGTGGTAT TGACGATACC 
GTAGCGAATA CGATCGTCGC TCAATTGCTC TTTCTGCAAT TTGAAGATAG CAAAGCGGAT 
ATCCACCTCT ACATTAACTC GCCAGGTGGA TCGATCACTG CAGGAATGGC CATCTACGAT 
ACGATGCAGT ATCTCTCATG TGATGTCGCC ACCTATTGCC TTGGCCAGTG TGCCAGTATG 
GGTGCTCTGC TGCTGACTGC CGGTGCTGCA GGTAAGCGTC ATGCTCTACC CAACAGCCGC 
ATCATGATTC ACCAGCCTCT GGCGGGGATG CAGGGGACTG CGACCGAACT GGAGATTCAC 
GCGAAGGAAG TTCTCCGCGT GAAGCGCCGG ATGAATGAGA TTCTGCTCAA GCATACCGGG 
CAAACCTATG ACCAGATCGA AAGAGACACC GATCGCGACA ATTTCATGAT GCCGGACGAA 
GCGAAGTCCT ATGGCCTGAT CGATAAAATC CTTGAGAAGA TGCCCGCATC GCCTGCCGTT 
CAAGGCTAA
 
Protein sequence
MTNLVPYVIE KNGRDERAMD IYSRLLRDRI IILGSGIDDT VANTIVAQLL FLQFEDSKAD 
IHLYINSPGG SITAGMAIYD TMQYLSCDVA TYCLGQCASM GALLLTAGAA GKRHALPNSR 
IMIHQPLAGM QGTATELEIH AKEVLRVKRR MNEILLKHTG QTYDQIERDT DRDNFMMPDE 
AKSYGLIDKI LEKMPASPAV QG