Gene Plim_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3334 
Symbol 
ID9140049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp4314731 
End bp4315402 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID 
Productguanine-specific ribonuclease N1 and T1 
Protein accessionYP_003631346 
Protein GI296123568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.670028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTTCCT CCCGGTTCCG CATGACTCGC ACCCATCTGG TGCTCCTGAT CGTTTTCGTG 
AGCTTGAGTC TCGCGTGGCA GTTCGTCGTG GAGCGACAAC CTGCCACATC GTCGCCTCCA 
TCAACAATTC AGAATCCTGC ACCAGCGACT GAAGCTGAAT CCGAAGAGAA TCACACCTTG 
ACGGAGGCTT CGAATCCGGC AAATGCCGAG GTCCGACAAG GTGCCTCACA GTCCGTTCAG 
CAACCAGAGG CATTGAGAAA CTCTCCGGCT GATGCATCTC CCGTCATACG ACCGAATGCA 
GGGAATTCAC TCGGGAATTC CAAGGTCGCT TCGCCTGAGA AATCGCCCAC TCCCTCTGCT 
GAAAAGCGCT GGATTGTTGC CAAGCAGACG GTCAAGGATT TGCAGGGGAA GGTGGTTTAT 
CGAGGTGATA TTGATCTGAC CGAAACGATC ACCCGGATCG AAGCGGGCGA GAAGCTGCGG 
TTTCGAAATG ATGGTTCTGT GTTTCAAAAT CGCGAACGCC GGTTGCCAAC TCGAGAAGCA 
GGTTATTATC GCGAGTGGGT GCATCCCACA GCGGAACTGG ATGGGCCTGG CCCTCAGCGA 
ATCATTACGG GAAAATCGGG TGAGATTTAT TACACTGCCG ATCATTACGG CAGCTTCAAG 
AAGTTGAAAT AG
 
Protein sequence
MPSSRFRMTR THLVLLIVFV SLSLAWQFVV ERQPATSSPP STIQNPAPAT EAESEENHTL 
TEASNPANAE VRQGASQSVQ QPEALRNSPA DASPVIRPNA GNSLGNSKVA SPEKSPTPSA 
EKRWIVAKQT VKDLQGKVVY RGDIDLTETI TRIEAGEKLR FRNDGSVFQN RERRLPTREA 
GYYREWVHPT AELDGPGPQR IITGKSGEIY YTADHYGSFK KLK