Gene Plim_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3331 
Symbol 
ID9140046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4312329 
End bp4313576 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content54% 
IMG OID 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_003631343 
Protein GI296123565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGACC GAATGCTGCC TATCGTCCCG CCCTGCACCA GAAGCCTCAT TCTGGGAACG 
ATCCTCTGTT TGACTGTGAT TCCCTGTGGT TGCAATTCGC TGACCAAAAA AGTCGATAAT
CCCGTGATGG TTCCTCCTCC CCGGAGAGTG TCACTGAATG ATGAGCGAGC CAATGCCGCC
GATAAAGCGC TGGCCGAAGG TTCCCTCAAG CTGAAGCAGG CGGCTGCCAG CGATATCGTG
CAGACATCGG GGGAAGAAAC GATTCTGGCC CAGAATGATG ATGCGGTCTT CGGTGCCCAG
GTGGTGGCAA GGGTAAATGG CGCCCCAATT TTTGCCAGTG AAGTCCTCGA GCGGTATGGC
GAAGTTCTGG CTCAGGCCCG CGAAAAACTC CCGCCCGATA AATTCAATCT GCTGCGCGAA
AACATTATCG CCCAAAATCT GAGAGCACAT GTTGAGCGAC AGTTAATTGT CGAGCGCATG
CGAGCGGACA TGAAGCCCGA TCAACTGAAG CAGTTGGATG GGTATCTTGA TGCCGCCTTC
GAAAAAGAAA TGGTCAAGCT GAAAGAGCAG CTGAAAGTTC AAACCAAGCC CGAGCTGGAA
TACGAACTCA ACAAGCGCGG GACCTGCCTG GAAGATGTCC GGCAATCCTT CCAGAACAAC
CGGATTGCGA TGGAGTATCT GGCAGTCAAG GCCGGCAAGC CTGAGCCGAT CAATCGTAAA
GATCTGGTGG AGTACTATGA ATCGCATCCC GAAGAGTTCC GCCTTGAATC CCGCGTGAAG
TGGAAACAGA TTCAATGTTC GTTCCTGAAG AGCGATCAGG AGCAGGCCCG GGTGAAGATG
AAATCGGCAC TCGAAGAACT CGCGAATGGC GAGTCCTTTG AGGATGTCGC CAGGAAGTAC
TCCGATGGGG TAACTGCGAA AGAGGGTGGG CACTGGGATT GGACCCAGAA AGGAAGCCTG
AGCGATAAAA AGCTGGAAGA GATCCTCTTC ACAGCCAAAG TTGGCGAACT GAGCGATGTG
ACGATTATCG GCCGGGCCTA TCAGGTTGTG TTTGTGGAAG AGCGGGAATC GGCGGGCATG
CGACCCTTTG CAGAGGTCCA GCAGGAAATC CACAAGAAAA TCGAGCCGAC CCGTTTTCCC
AACCCCCGCA AAATCCTCGA CGCCATGCTC GCCAGTGCCG TCATCGAAAC CGATTACCCA
CTCGGCCTCG ACACCGCGAA GGCTGGCGCA AACAACGCCA CCAAGTAG
 
Protein sequence
MIDRMLPIVP PCTRSLILGT ILCLTVIPCG CNSLTKKVDN PVMVPPPRRV SLNDERANAA 
DKALAEGSLK LKQAAASDIV QTSGEETILA QNDDAVFGAQ VVARVNGAPI FASEVLERYG
EVLAQAREKL PPDKFNLLRE NIIAQNLRAH VERQLIVERM RADMKPDQLK QLDGYLDAAF
EKEMVKLKEQ LKVQTKPELE YELNKRGTCL EDVRQSFQNN RIAMEYLAVK AGKPEPINRK
DLVEYYESHP EEFRLESRVK WKQIQCSFLK SDQEQARVKM KSALEELANG ESFEDVARKY
SDGVTAKEGG HWDWTQKGSL SDKKLEEILF TAKVGELSDV TIIGRAYQVV FVEERESAGM
RPFAEVQQEI HKKIEPTRFP NPRKILDAML ASAVIETDYP LGLDTAKAGA NNATK