Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3331 |
Symbol | |
ID | 9140046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4312329 |
End bp | 4313576 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_003631343 |
Protein GI | 296123565 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGACC GAATGCTGCC TATCGTCCCG CCCTGCACCA GAAGCCTCAT TCTGGGAACG ATCCTCTGTT TGACTGTGAT TCCCTGTGGT TGCAATTCGC TGACCAAAAA AGTCGATAAT CCCGTGATGG TTCCTCCTCC CCGGAGAGTG TCACTGAATG ATGAGCGAGC CAATGCCGCC GATAAAGCGC TGGCCGAAGG TTCCCTCAAG CTGAAGCAGG CGGCTGCCAG CGATATCGTG CAGACATCGG GGGAAGAAAC GATTCTGGCC CAGAATGATG ATGCGGTCTT CGGTGCCCAG GTGGTGGCAA GGGTAAATGG CGCCCCAATT TTTGCCAGTG AAGTCCTCGA GCGGTATGGC GAAGTTCTGG CTCAGGCCCG CGAAAAACTC CCGCCCGATA AATTCAATCT GCTGCGCGAA AACATTATCG CCCAAAATCT GAGAGCACAT GTTGAGCGAC AGTTAATTGT CGAGCGCATG CGAGCGGACA TGAAGCCCGA TCAACTGAAG CAGTTGGATG GGTATCTTGA TGCCGCCTTC GAAAAAGAAA TGGTCAAGCT GAAAGAGCAG CTGAAAGTTC AAACCAAGCC CGAGCTGGAA TACGAACTCA ACAAGCGCGG GACCTGCCTG GAAGATGTCC GGCAATCCTT CCAGAACAAC CGGATTGCGA TGGAGTATCT GGCAGTCAAG GCCGGCAAGC CTGAGCCGAT CAATCGTAAA GATCTGGTGG AGTACTATGA ATCGCATCCC GAAGAGTTCC GCCTTGAATC CCGCGTGAAG TGGAAACAGA TTCAATGTTC GTTCCTGAAG AGCGATCAGG AGCAGGCCCG GGTGAAGATG AAATCGGCAC TCGAAGAACT CGCGAATGGC GAGTCCTTTG AGGATGTCGC CAGGAAGTAC TCCGATGGGG TAACTGCGAA AGAGGGTGGG CACTGGGATT GGACCCAGAA AGGAAGCCTG AGCGATAAAA AGCTGGAAGA GATCCTCTTC ACAGCCAAAG TTGGCGAACT GAGCGATGTG ACGATTATCG GCCGGGCCTA TCAGGTTGTG TTTGTGGAAG AGCGGGAATC GGCGGGCATG CGACCCTTTG CAGAGGTCCA GCAGGAAATC CACAAGAAAA TCGAGCCGAC CCGTTTTCCC AACCCCCGCA AAATCCTCGA CGCCATGCTC GCCAGTGCCG TCATCGAAAC CGATTACCCA CTCGGCCTCG ACACCGCGAA GGCTGGCGCA AACAACGCCA CCAAGTAG
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Protein sequence | MIDRMLPIVP PCTRSLILGT ILCLTVIPCG CNSLTKKVDN PVMVPPPRRV SLNDERANAA DKALAEGSLK LKQAAASDIV QTSGEETILA QNDDAVFGAQ VVARVNGAPI FASEVLERYG EVLAQAREKL PPDKFNLLRE NIIAQNLRAH VERQLIVERM RADMKPDQLK QLDGYLDAAF EKEMVKLKEQ LKVQTKPELE YELNKRGTCL EDVRQSFQNN RIAMEYLAVK AGKPEPINRK DLVEYYESHP EEFRLESRVK WKQIQCSFLK SDQEQARVKM KSALEELANG ESFEDVARKY SDGVTAKEGG HWDWTQKGSL SDKKLEEILF TAKVGELSDV TIIGRAYQVV FVEERESAGM RPFAEVQQEI HKKIEPTRFP NPRKILDAML ASAVIETDYP LGLDTAKAGA NNATK
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