Gene Plim_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3323 
Symbol 
ID9140038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4296826 
End bp4297989 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content56% 
IMG OID 
Product3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein 
Protein accessionYP_003631335 
Protein GI296123557 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTATT CCAAAGTCTT TATTGAAACC ATTGGTTACG AACTGGCGCC CGAAGTTGTT 
TCTTCGGTTG AGCTGGAAGA ACGCCTGGCA CCGGTTTACG AGAAGCTCAA AGTGAGCCCC
GGGCAGTTGG AAGCCTGGAC AGGGATTAGC GAACGCCGCT GGTGGCCGGA AGGCTATAAA
CTCACCAGTG GAGCGACAGC AGCGGCCCGC AGGGCACTCG AACAATCGAA CGTTTCGACG
CGCGATCTTG GTGTGCTGAT TTATGCGGGT GTCTGCCGGG AACAGTTTGA GCCGGCAACC
GCCTGTGGCG TGGCAGCGAA CCTTCGTCTG ACCGATGACG TGGCGGTCTA TGATCTCAGC
AATGCCTGTC TGGGTGTGCT CAATGGAATC ATCGATATTG CCAACCGGAT TGAACTGGGG
CAGATTCGTG CAGGGATGGT TGTTTCCTGC GAATCGGCTC GCGAGATCAT CGAGTTCACG
ATCCAGCGGT TGCTCGAAGA CCCGACGATG GAGAATCTGA CACACTCTCT GGCCACGTTA
ACGGGTGGGA GTGGTGCCGT CGCTGTGATC CTCACCGACG GATCCTTCTC GCGAGCGCGT
GGGCACAAAC TGCTGGGTGG CAGCTTGTTG GCTGCTCCCG AGCATCACGA ACTCTGCCGC
TGGGGTTTTG AATCTCTTTT ACCTGCGGCT GTGAACAAGG TCGAGCAGGT GCTTCCCAGT
GCTGTGACAC AAACGAGGCT GGGGTCACTC ATGCCGCAAC TGGTGCAACA GAAAGTGAGC
GGGATCTTGC CCGCCAAGCT TTCGCACGCC TTCCACCAGT TTATGCAGAC CGATTCGATT
TCCGTCATGA AGTATGGTGT CGAACTGGGA GTCAAAACGT GGGCTTCGAT GCTGGCCCGA
TTTGGGCTGA AGCCACAGGA AATCGACAAA GTCATCTGTC ATCAGGTGGG GAAGGGACAT
CGCGAACAGG TTCTGAAATC GCTGGGAATT CCGCTGGAAA AAGACTTCCC GACCTTTCCC
TTTCTCGGGA ACATGGGGAC AGTCTCTTTG CCAATGACCG CTTCACTGGC GGAAGAGCGT
GGTTTTCTGA AGAAGGGCGA CCGCGTGGCA TTTCTCGGGA TTGGGAGCGG TCTCAACTGC
CTCATGCTGG CGGTCGACTG GTAG
 
Protein sequence
MRYSKVFIET IGYELAPEVV SSVELEERLA PVYEKLKVSP GQLEAWTGIS ERRWWPEGYK 
LTSGATAAAR RALEQSNVST RDLGVLIYAG VCREQFEPAT ACGVAANLRL TDDVAVYDLS
NACLGVLNGI IDIANRIELG QIRAGMVVSC ESAREIIEFT IQRLLEDPTM ENLTHSLATL
TGGSGAVAVI LTDGSFSRAR GHKLLGGSLL AAPEHHELCR WGFESLLPAA VNKVEQVLPS
AVTQTRLGSL MPQLVQQKVS GILPAKLSHA FHQFMQTDSI SVMKYGVELG VKTWASMLAR
FGLKPQEIDK VICHQVGKGH REQVLKSLGI PLEKDFPTFP FLGNMGTVSL PMTASLAEER
GFLKKGDRVA FLGIGSGLNC LMLAVDW