Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3322 |
Symbol | |
ID | 9140037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4295331 |
End bp | 4296737 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | metal-dependent phosphohydrolase HD sub domain protein |
Protein accession | YP_003631334 |
Protein GI | 296123556 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCGAA ACTTCATCAG CGAAAGCCTC TCCCACGATC CGATTCACGG TTATATTCCG TTCATTTCGC GTGGGGGTCT GCCAGCGGGA GAGACAGCTG AGCAGGATAT CATTGATCAT CCGTGGGTGC AGAGGCTCCG GCATATTCAT CAGTTACAGA CGGCCTGGTG GGTTTTTCCG GCGGCTGAGC ACATGCGGTT TCAGCATGTG ATGGGGGCCA TGCATCTGGC CTCTGTGGCC ATTGACTACT GGTACGATTC ACTGTGCGAT GCGTGCCGCA ATGTCCCTTC GCGGCCTTAT GTCGAATCGC TATTGCGCAT GGCGGCTCTG CTCCACGACG TAGGGCATGG GCCGTTCGGC CATTTCTTTG ATGATCATTA CCTGGCACAG TTCGGTGTCA CTCACGAAGA TGTGGGAGGC GTGATTATCG AGCAGGAACT GGGAGAACTG CTGCGGGGGA TCCGGCGGAA TCCCAAAGGA GAACTCAAGC CCCTGGAAGA ACTCGATCCC CGGCAGATTT CGTGGCTGAT CCGCCGGCCC AGGCCAGGTT CCCCCGATGA CGAAGGCCAT CCCGACTGGC TCAAAAAACT GCGGGCCATG TTCAGCGGTA TTTATACTGT AGACAACATG GATTTCGTCT TGCGCGATGC CTACATGACG GGCTATAACG TGCGGGCGTT TGATATCTCC CGGTTGCTCC ACTATTCGTT CTTTACTCCT CAGGGCTTAA CGATTCATAT TCGTGGCTTG CCCACATTGA TCAATTTCAT CGAAACCCGT GCCAACCTCT TTCGCACCGT CTACTTTCAT CGCACTGTGC GGGCCATCGA TCTGGCACTG GAAGATCTGT TTCCCGAAAC GATGCCTCAC CTGTTCCAGG GGAGCCCGAT TGGTCAGTTG GAAAACTACC GCCGGTTGAC GGAATCGTCA TTTCTGGTCG ATGTGGATCG CTTCTCGCAA TCAACCGATC CTGCGACACG CCAGTTGGGC GAGCGCTGGC AGAAGATTCT TTCGCGCGAA GTCCATTGGA AGATGGCGAC AGAGCGCACC ATGGGGTACT ACACCAGCAG TGCCGAGCGG ATGTCGATCT TCTCGGAACC TGACCTCATC GAGCAGCGCT TGCGCGGCCG GTTGCCAGAG GATAAGAAGT CGATTGAAAT GCGAATCGAT GTGGCCCGGC ATTATCATCG GCCCAGTGGC AGGCTCCCAG TGGGTGGTCA AAATCATCTG TTTGATCCAG CGGCGAATGG GATCACAGAA CTGTCGGATG ATGAACTTTT CCGGCAGTTG CCACTGAGTC TGTCGGTATT CCGCGTGTAC AGTCGGGATC ACGCGAACGA TAAGGCCATT ACGATGGCTT TGCAGAGCCT GCTGGGCGAT GCCGGCGACG CCAAGACAAA TATGTAA
|
Protein sequence | MSRNFISESL SHDPIHGYIP FISRGGLPAG ETAEQDIIDH PWVQRLRHIH QLQTAWWVFP AAEHMRFQHV MGAMHLASVA IDYWYDSLCD ACRNVPSRPY VESLLRMAAL LHDVGHGPFG HFFDDHYLAQ FGVTHEDVGG VIIEQELGEL LRGIRRNPKG ELKPLEELDP RQISWLIRRP RPGSPDDEGH PDWLKKLRAM FSGIYTVDNM DFVLRDAYMT GYNVRAFDIS RLLHYSFFTP QGLTIHIRGL PTLINFIETR ANLFRTVYFH RTVRAIDLAL EDLFPETMPH LFQGSPIGQL ENYRRLTESS FLVDVDRFSQ STDPATRQLG ERWQKILSRE VHWKMATERT MGYYTSSAER MSIFSEPDLI EQRLRGRLPE DKKSIEMRID VARHYHRPSG RLPVGGQNHL FDPAANGITE LSDDELFRQL PLSLSVFRVY SRDHANDKAI TMALQSLLGD AGDAKTNM
|
| |