| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3304 |
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| Symbol | |
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| ID | 9140019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4267103 |
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| End bp | 4270810 |
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| Gene Length | 3708 bp |
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| Protein Length | 1235 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003631316 |
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| Protein GI | 296123538 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.23554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAGG ATGGTCAGCC TGAAGTAATC CCTCACATGT TTGAAACGAC TCGCACATCC
GCCGTGCGGA TCATGGCGAT GACTGTGCTC CTTTTATGGA ACCAGGGTGT GCTCACCGGG
CAGGAGGGCA CAAGACCTGC CACAGAAACT CCACCACCTG CGGGATCGAC CAACGCTTCC
ACACCTCCCA GTGCAGCCCC ACTTTTAACA GCTGCTGCTG ATGAACCGCT CACACCGGCG
GTGATCGAAC GTCTTTCGAG ACAAGCCGCT GATCTCACGG ATCTGGATGC TGCCACCAAA
AAGTCGATTG CTGATTTCTA TCAGCAGGCC ATGGATTCCT GGAAACAGGC CGAAGCCAGG
CAGGTTCGCC AGAAAGAGTT TGACCGGCTC GTGGGGACAG CCGAAGGGTT GCTCAAAGAG
ACTCAAGCCA AACTGGTAAA ACTCCCCAAG GAAATCACGT TACCACCGGC GGCTGCCAAT
GCCGATCTCG AAGCTCTCAC CAGTGATATC GCCACTCTGA AAGCGCGTAT CGAGCATCCT
GAAACCGGCC TGACGAAAAG ACTGGCGGAT CTCAACGGAG AAGCTGCGCG ACGATCGAAT
CGTCTGAAAG AAATCCCCAC GCTGATTACG ACGGCTCAGG CTCGACTCGA AGAGCTGACC
AAACAGCAGG AGCAGGCCCC CGCCGAAGGC GAAGCCTCAG CTCTCACTCA AGCCCGTCGG
ATCGCCATTT ATGCCCAGCG TATGGCCATT CTCCGGGAGA TTGGAGCACT CCGGCAGGAG
CAGTCGTGGT ACGAACTTCC TGCGAGCAGT GCCCTGGCCC GCGAACAGCG AGACTTAGCG
GCTCGCGAAC TCTCACTTTC GCAGCAGGAG GTCGAGCAGT TGCAAACGAT CCTGGCACGC
CGCAGGCAGC AGGATGCCGA GATGCGCGTC AAGCAGGCCC AGCGCGAAGC AGCTTTGGCT
CATCCCATTC TCAAACCATT AGCAGAAGTT AATGAAAAAC TGGCCCAGCA GGATCAGCAA
CTGGCCCAGA AGACACAGCG GGCTGTGCGT GACCTGGCCG AGATTCGCCA GCAGACTCAG
CGATTAAAGG ATGATTTTCG CCGGGTCCAG GAAATGGTCA ACACCGTCGG ATTGACCGAA
TCGATTGGGC TGCTGCTGAG GAAAAAACGC TCTTCGTTAC CAGACCTGGG AGCCATTTCG
GAACGTCTGA CGGCCGATGC CGATGTCTTT CGTGAACTGC AATTGAAGCT CTTTGAAATC
GACGATGAGC TGACCACTCT TCGATCCCCG GAACTGGTGC TGGGGCAGGT GCTTGCCAGC
CTCAAACTGA CATCGAACGA TGTCCCCAAG GAGATTCTGG AAGCCCAGGC CGAGATACTT
TTGAAGCAGA AACGCGATCT GCTGACGACA CTGGATCGAA GTTACACCAC TGCCTTTGAG
AATCAGGTGG CACTGGATGC TGCCCGGAGA GAGCTTGTCG AGCAGGTGCA GCAGTTCCGC
AGCTATATCG ATGAGCGAGT CCTCTGGATT CGCACCAGTG GTCCGATCTC GCTGGAAACT
TTCCACGATG CCAGGGCTGC TGTGAAGTGG CTCTTCAGTG TAGAAGACTG GCAACAGGCT
TCTCAGGTGC TCATGAAAGA TCTCTGGCAA AGTTTTCCTT TGTATCTGCT CGCTGCTTTG
GGGCTGTTTC CGCTGTTGTT GTTGAGAAGG CGGATGGGTG TTGAAATCCG CCTGCTGGGT
GAGCAGTCGA TTCTGCCTTC ATGCCGGACA TTGACACCGA CCATGAGGGC GCTGACATGG
ACGATTCTGC TGGCCATTGG CTGGCCCGCC TTTGTGGGAT TTATGGCGTG GCGGCTGGCT
GATTCAGCGA GTTCGTCACT GACGACGGAA GAAATCGCCC GCTGCTTAAA AGTCTCAGCG
ATTTTTCTGC TGACACTTGA GTTACTGCGG ATGATTACCC TTAAAAAAGG ACTGGCTTCG
CACCATTTTG GCTGGTCTGA AAGCTTTGTG CGTCGTTTAT ATCGTGGGAT GACAACTCTG
GCTGTGTGTG GAACTCCACT GGTCTTTGCG ATCACATTTC TCAGTGTTCA TCAGCAGTCC
GACACGACGG ACGAAAAGTA TCTCGATGCG CTGGGCAGGC CGCTGTTTCT GCTGCTGTTG
GCGATGATCT CTGGAGTTTC GTGGGCGACG ATGTTCCGTC AGGTTCCCGG GACGCACCTG
CTGACTGGCG AGCCTGTCGA AAGTCCATTG ATTCAACGGG TGCAGACTCT GGCCAAGTAT
CTGGCCGTCG TGATTCCTCT GCTCCTCGGT GTGCTGGTGG CGATGGGTTA CTTCTATACG
GCAGGGCAAC TGGCGATTCG TCTGCACTGG ACATTCTGGC TCATTGTGGG ACTGATCATC
CTGCAGGCGA TTGTCATGCG CTGGATTACC ATTGAGCGTC GCAAGCTGGC CCTCGAACAA
GTCAAACAGA TGCGTCAGGC GGCTGAAGAA AGTGTGCGGC AGGTTCCAGG AAGTCTGGCG
ACAAATCTTC AAAGCCTGCT GTTTTCTTCG TTTAAGGTTG ATCTGGCGGC CATCGTCAAT
CAGGTGCGAT CACTGCTCAG GACGAGCCTC GTGATTGCCG GGCTGTGCGG AGTCTGGTTC
ATCTGGGCCG ATATTGTGCC CGCATTAGGG ATTCTCGATC GTCTCGAACT GTGGGAAACC
ACGCAAACTG TGGCTGCATC TGCGGCTGCT CCGTCTGCTT CCTCATCAGC CCCAGATGGA
GCAGCGGGCA AGCCTGCCAA TAATACTTCA AGCAGTTCTG TGAGCGGGTA TCGCAAAGTT
ACGGCACGCG ATCTGGCAGT GGCGATTCTG ATCTTCGCAG CCGCATTGAT TGCGGGGCAG
AACATCCCGG GCCTGCTGGA AGTCGCCCTG CTGAGAAGAT TGTCGAGTGA TCGGGGGCTG
CACCTGACGG TCATTACGCT CGTTCGCTAT CTGATCTTTA CGCTGGGAGT GATTCTGGCC
TTCGGTCAGA TCGGTGTCAG TTGGTCGAAT GTGCAATGGC TCGTGGCGGC TGCCAGTCTG
GGACTGGGCT TTGGTCTGCA GGAGATTTTT GCCAATTTTG TCTCGGGTAT TATCATCCTG
CTCGAACGAC CCATTCGTGA AGGGGATGTC GTTACTGTTG GAGATGTTTC CGGAACGGTT
TCCAAGATTC GATTTCGAGC CACGACCATT ACGGATTGGG ATCGTAAAGA GCTTCTGGTT
CCGAACAAAG AATTTATCAC CAGCCGCGTC TTGAACTGGA CGCTCTCCGA TAAGGTGAAT
CGACTCACGA TCAAGGTGGG AGTCGCCTAC GGCTCAGATC CATTCAAGGT TCAAGAGGTG
CTGATGAAGT GTGTCACCAG CATTCCCCAA GTATTGCAGA ACCCACCCCC CTCAGTGGTT
TTCGACGAAT TCGGCGACAA CGCCATGCGG TTTACGATCC GCTTCTTCCT GCCGGATCTT
GAAAATCGAC TCACAGTCAC GCATCAATTG CATATCGCGA TTTACCGTGA ACTGGCTGCT
GCAGGGATCG AGATTTCGTT CCCGCAAATG GATCTGCACG TGCGCTCGAT TCCCGAAGAC
TGGAAGATCG CGGCTGCCAA CGTCGCTCAC GAAGCCCATG CGAATCCGAC AAGAGAAGGT
CAGCCACGCT CGTCAACACC ACTCGACATT GCAGATTCCG ACGGCTAA
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| Protein sequence | MLKDGQPEVI PHMFETTRTS AVRIMAMTVL LLWNQGVLTG QEGTRPATET PPPAGSTNAS
TPPSAAPLLT AAADEPLTPA VIERLSRQAA DLTDLDAATK KSIADFYQQA MDSWKQAEAR
QVRQKEFDRL VGTAEGLLKE TQAKLVKLPK EITLPPAAAN ADLEALTSDI ATLKARIEHP
ETGLTKRLAD LNGEAARRSN RLKEIPTLIT TAQARLEELT KQQEQAPAEG EASALTQARR
IAIYAQRMAI LREIGALRQE QSWYELPASS ALAREQRDLA ARELSLSQQE VEQLQTILAR
RRQQDAEMRV KQAQREAALA HPILKPLAEV NEKLAQQDQQ LAQKTQRAVR DLAEIRQQTQ
RLKDDFRRVQ EMVNTVGLTE SIGLLLRKKR SSLPDLGAIS ERLTADADVF RELQLKLFEI
DDELTTLRSP ELVLGQVLAS LKLTSNDVPK EILEAQAEIL LKQKRDLLTT LDRSYTTAFE
NQVALDAARR ELVEQVQQFR SYIDERVLWI RTSGPISLET FHDARAAVKW LFSVEDWQQA
SQVLMKDLWQ SFPLYLLAAL GLFPLLLLRR RMGVEIRLLG EQSILPSCRT LTPTMRALTW
TILLAIGWPA FVGFMAWRLA DSASSSLTTE EIARCLKVSA IFLLTLELLR MITLKKGLAS
HHFGWSESFV RRLYRGMTTL AVCGTPLVFA ITFLSVHQQS DTTDEKYLDA LGRPLFLLLL
AMISGVSWAT MFRQVPGTHL LTGEPVESPL IQRVQTLAKY LAVVIPLLLG VLVAMGYFYT
AGQLAIRLHW TFWLIVGLII LQAIVMRWIT IERRKLALEQ VKQMRQAAEE SVRQVPGSLA
TNLQSLLFSS FKVDLAAIVN QVRSLLRTSL VIAGLCGVWF IWADIVPALG ILDRLELWET
TQTVAASAAA PSASSSAPDG AAGKPANNTS SSSVSGYRKV TARDLAVAIL IFAAALIAGQ
NIPGLLEVAL LRRLSSDRGL HLTVITLVRY LIFTLGVILA FGQIGVSWSN VQWLVAAASL
GLGFGLQEIF ANFVSGIIIL LERPIREGDV VTVGDVSGTV SKIRFRATTI TDWDRKELLV
PNKEFITSRV LNWTLSDKVN RLTIKVGVAY GSDPFKVQEV LMKCVTSIPQ VLQNPPPSVV
FDEFGDNAMR FTIRFFLPDL ENRLTVTHQL HIAIYRELAA AGIEISFPQM DLHVRSIPED
WKIAAANVAH EAHANPTREG QPRSSTPLDI ADSDG
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