| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3300 |
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| Symbol | |
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| ID | 9140015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4258439 |
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| End bp | 4261342 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | exporter of the RND superfamily protein-like protein |
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| Protein accession | YP_003631312 |
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| Protein GI | 296123534 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.107727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTA ATTTCTTCGA CCGTCGCGAC CCTTGGGGCC ACGGATACGG AGTTTACATT
TTTCTGCTGA TGCTGTTTCT GATTCCACCA GCCTTGTGGG GTCTCAAACA GACAAACCTG
CAGAATGACG TCGAAAACTG GCTCCCTTCT GACGACCCAC AACTGAAGAT CCTTAAGTGG
GCTCATTCAC GTTTCCCAGT CGAAGATCGC ATCTTCATCA CCTGGGATTC GAGTTCCCTC
AGCGATCCTC GCATTGCACG CCTCGCCCAA AAACTCGAGG GGGTGGCTGA TGCCGAAGGG
ATTCGTCGTG ATGGCATGAG CTGCATCTCC CGGGTTGTCC AGCCCGGAAC AGTCTTGCGA
TCCATGATTG AAAACGGGGT CGAATTTCAT GAAGCCGTTC GCAGGCTCGA AGGCACGATC
ATCGGTGCCG GGCCACTCAA GCTGCGGCTG ACACCCGAAG GCCGCAATCG CTTGCGGACA
ACGGAACGTC AGCTCGCCGA AGCGATTCGC GAAAAATTCC ACATTGACGT GACGATCCAG
CCTGCGATGT CGGATGCGGT TTCAGCAGCG ACGTTAGCTT CTGTTTCCGT CGAAGCTTCC
ACACCTTCAC AGGTGACCAT GGCCAAAGCG GAAGCTGTGG ATCAGGAAGC GGCCAACGTC
CTCGCGACAG CCGTTGATGT AGACGGAACC GAACCAGCCA CAACTCCGAC GATTCTTTCA
CCGCAAGGTG AACTTCTGGA AGATGCCTCT CACGCCCACG ATTTACAAAT CTCCTGGAAT
GGTCTGCGAC TCGGTCATCC ACAAACCATC GAAATTGCCG AGTGGCTCAC CAGCCTCCAG
AGTAAGCCCA CGCGACCCAA TGAAGTGGTT CACCCCCTCG TTGAGCAGGC GTTCTTCATT
CCAGGTTCTC CCGTCGCTCT GGCTGTGAGT CTTTCCGAAG CCGGCACAGC CGATCGTAAA
GGGACACTTG CTGCCATTCG GCAAGCGGTC CTTTCTTCAG GTGTTCGCGA AGAGGAAATG
CATATCGGCG GCTCGGCTGT CGTGGGGACA GAACTCAATG GCGCTGTCTC CCGCGCTGCC
TGGGATGAGT CTCAGCCGTG GCGATTCCCG CATCGAAAAT CAGTTCTGCT GTTTTCCGCT
CTGGTAGGAA CAGCCCTCGC GTTTGTCATG CTCAAACGCG TCAGTCAGAC GCTGATTGTC
CTGTTTGTGT CGATGTACGT TCCCTTTCTG ACGACTGCCA TTGTTCCTGT TACTGGTGGC
AGCATGAACA TGGTGCTGGT CGTCATGCCA TCTCTGCTGA TGGTCCTGAC ACTTTCCGGT
GCGATCCATA TTGTCAATTA CTACAACAAG TGCGCAGAAA CCAATCCTTC GCTCGCACTT
TCCGAAGCCT TTCGACATGC CGCCATGCCC TGCTTTTTAG CAGCTCTGAC AACCGCCATT
GGCCTGTTAT CCCTCGTGAC CAGTCCACTC TCTCCCGTGC GGGATTTTGG CATCTATTCT
GCAATTGGGA TGGTCGTTTC ACTCGGCATG ATTGTCTACG GCGTACCATC GCTGTTACAG
CTCTGGCCCG ATAAGGTGGC TCCCACAGCC GAGACAAACT CGAATGCCTG GCGCTGGCTG
GGCAACAAGC TCGCCACGGG TACCAACCTT CAGTTAGCTG CCTGTCTCGC ACTGAGTTTA
GTCGCAAGTT ACGGCCTCAT TTTCTTCCGG ACCGAAACCA AGGTCATTCG TTACTTCCCA
GAGTCATCAC GTGTCGTACA GGACTATCGC GCGATTGAAA ATCATTTGGC GGGGATCACG
CCGGTCGAAG TGATTGTTCG CTTCGATGAT GCCGCCCAGC AGCAGACCAA CTTTCTGGAA
CGCATGGAAG CGGTTCGAGA AGTTGAGGCC CATATCAAGC GGCACCCGGA AATCAGCGGT
GCTGTGGGGC TGGCCGACTT TCTGCCCGTG AGTGAGAAGC CCGAAGCCAA TGCCTCCGTC
CTGGCAAATG CGCGTTACAA CAAACGCGCA AATACGATCG AGCAGAAAAT TCGAGATAGT
GAAATTCCCG GCTCAGCCTC CTTCTACACG ATGGCCGAAT CAGGTCAGGA TCTCTTCACT
CCCGGTGATT ACAAACTCAA TCGTCCTGGC GACGAGTTGT GGCGCATCAC CGCACAGGTC
TCCATTCTCT CACCCATCGA CTATGTGCAG GTCGTCGATT CTCTCAATGG CACCACGCAG
GAAATTTTGA AACTACACCC CGGTGCCATG CACGTCGTGA CGGGCACTGC TCCGCTGTTT
TTAAGAACTC AGCAGGCTGT GCTGGAAAGT CTCATTTCCA GCTTCGGGCT CGCTTTTGTG
CTGATTCTGG CTGTGATGGT GATCTTGCTG AAAAACTTCA TGGCCGGCCT GGTTTCGATG
ATCCCCAATG TCCTGCCCAT TACCATCGTC TTTGGGCTCA TGGCCTGGTT TGGACAGCGG
GTCGATATCG GCTCCATGAT CACTGCCTCA GTCGCACTGG GGATTGCCGT CGATGGCACA
CTCCATTACA TCGCCTGGTT CCAGAAGCAG ATGCTGGCCG GCCAAACCCG CAAAGAAGCA
GCGATTCGAG CACTCGAACA TTGCGGCCCC GCCATCTGGC AAACCAGCGT CGCAGTGAGT
CTCGGCCTGC TGGTGCTTAT GCCCTCGGAA CTGCTGCTGA TCAGCCGGTT TGGCTGGTTG
ATGGCCGCCC TGGTCGCCGT CGCCATGCTT GGCGATCTGA TTCTGTTGCC CCTCTTAATG
CTGTCACCCA TTGGAAAAAT TCTGGAACCA GTCGCGTCAG CAGAAACACA GGAGATTCTC
GAAGCCATCG AGCCAGACAC CCTGCCAGTA GCCGCCACCA CCATGCGCCT GGCACCCGTG
ATCACACCAT CGGATTCCCG ATAA
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| Protein sequence | MSSNFFDRRD PWGHGYGVYI FLLMLFLIPP ALWGLKQTNL QNDVENWLPS DDPQLKILKW
AHSRFPVEDR IFITWDSSSL SDPRIARLAQ KLEGVADAEG IRRDGMSCIS RVVQPGTVLR
SMIENGVEFH EAVRRLEGTI IGAGPLKLRL TPEGRNRLRT TERQLAEAIR EKFHIDVTIQ
PAMSDAVSAA TLASVSVEAS TPSQVTMAKA EAVDQEAANV LATAVDVDGT EPATTPTILS
PQGELLEDAS HAHDLQISWN GLRLGHPQTI EIAEWLTSLQ SKPTRPNEVV HPLVEQAFFI
PGSPVALAVS LSEAGTADRK GTLAAIRQAV LSSGVREEEM HIGGSAVVGT ELNGAVSRAA
WDESQPWRFP HRKSVLLFSA LVGTALAFVM LKRVSQTLIV LFVSMYVPFL TTAIVPVTGG
SMNMVLVVMP SLLMVLTLSG AIHIVNYYNK CAETNPSLAL SEAFRHAAMP CFLAALTTAI
GLLSLVTSPL SPVRDFGIYS AIGMVVSLGM IVYGVPSLLQ LWPDKVAPTA ETNSNAWRWL
GNKLATGTNL QLAACLALSL VASYGLIFFR TETKVIRYFP ESSRVVQDYR AIENHLAGIT
PVEVIVRFDD AAQQQTNFLE RMEAVREVEA HIKRHPEISG AVGLADFLPV SEKPEANASV
LANARYNKRA NTIEQKIRDS EIPGSASFYT MAESGQDLFT PGDYKLNRPG DELWRITAQV
SILSPIDYVQ VVDSLNGTTQ EILKLHPGAM HVVTGTAPLF LRTQQAVLES LISSFGLAFV
LILAVMVILL KNFMAGLVSM IPNVLPITIV FGLMAWFGQR VDIGSMITAS VALGIAVDGT
LHYIAWFQKQ MLAGQTRKEA AIRALEHCGP AIWQTSVAVS LGLLVLMPSE LLLISRFGWL
MAALVAVAML GDLILLPLLM LSPIGKILEP VASAETQEIL EAIEPDTLPV AATTMRLAPV
ITPSDSR
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