| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3297 |
|---|
| Symbol | |
|---|
| ID | 9140012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4255255 |
|---|
| End bp | 4255782 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ |
|---|
| Protein accession | YP_003631309 |
|---|
| Protein GI | 296123531 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0209201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC CATCCATCTA CAGCATGGAC CTGGTTGATT TCGACCGCCC CATTTTTACC
CTCGAACAGA TTCGGGAGAT TAACCCCCAG CGGTTCGAAA TGGAGCAGCT CACGTCCATT
CTGTATGTCG ATACTGAGGG GCACGGCATC ATCGGCTACA AGCAAGTGAC TGACCAGGAG
TTCTGGGTGC GCGGCCACAT GCCTGGCTTC CCCCTGATGC CCGGAGTGAT TCTTTGCGAA
TGTGCGGCCC AATTGGCTGG CTTTTATGCC CGAAAATACC GTCTGCTGGA TGGTGATTTC
CTGGGCTTTG GTGGTATGAA CGAAGTTCGT TTCCGTGCGC CAGTCGTGCC CGGAGATCGC
CTTCTGATTA TGGCGAAGCT GACTCGACTG AGAACTGGCA AGCGGGCCGA ATTTGATTTT
CAGGGCTTTG TGGGCCAGAA GATGGTCTAC AGTGGCCAGA TGATTGGTGT CCCCATTGAG
AAGGATCCGG CCAAATCCAC CAGCGATGCC AGCGAATCGC TGGTCTGA
|
|---|
| Protein sequence | MPAPSIYSMD LVDFDRPIFT LEQIREINPQ RFEMEQLTSI LYVDTEGHGI IGYKQVTDQE
FWVRGHMPGF PLMPGVILCE CAAQLAGFYA RKYRLLDGDF LGFGGMNEVR FRAPVVPGDR
LLIMAKLTRL RTGKRAEFDF QGFVGQKMVY SGQMIGVPIE KDPAKSTSDA SESLV
|
|---|
| |