Gene Plim_3293 details

Gene Information

• Locus tag: Plim_3293
• ID: 9140008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4251975
• End bp: 4252643
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 53%
• Product: protein of unknown function DUF820
• Protein accession: YP_003631305
• Protein GI: 296123527

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00444242
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTGA ATGACCGCCC CGATGACGCG TCACAAGAAA AGCCCACAGG TTTTGGAACA 
GGCCATGGTT TTCGGCCCGT CGTGCCCCAA GAAATCTCAC AACGTACGGT TCAAACGCGC 
GACGAATATC TGGCGGCTCT GGAAAATGGG GAACGCTGGA TTGAGATCGA GGAAGGAACG 
TTCTTACGTC AGGACCCTCC CGACGAAATG CACGGCAACA TCATTCGTAA CCTGACAACC 
GCCCTGGGCC CTTCTCTGAA AAGTGACGCC AGGTCGATTC CCTGTTTTGA ACTGCCACTC 
CTGCTCGATG AAGAGCGATT GACCATTCGC ATCCCCGCGA TCAGTTTTTA TCCACCGGCA 
ACAGGATTTG CCGTGATGGA TGAGCTGATG ACCACAGAGA TTCCAGTCCT CGTTGTGGAA 
ATTGCATCAT CGAGACTTCG CCGGGATTCG ATGTCGGCTC GGGTGAAAGG CTATCTGCAA 
AAAGGAGTTC AAGGCGTCTG GGTCATCGAT CCTGTGACCA GGCATGTGCA TCAGTTTTCG 
GAGGGGCTCC CTCCGAAAAT GATCAAAGAG ACCGAAACGA TGCATGGCTA CCCTTACTTT 
GCAGACCTGC ATCTGCTGGT GATGGATCTC TTTGCTGATC CAGTCTGGCT GAGAAGTTCA 
GGGAACTGA 

 

Protein sequence

MSLNDRPDDA SQEKPTGFGT GHGFRPVVPQ EISQRTVQTR DEYLAALENG ERWIEIEEGT 
FLRQDPPDEM HGNIIRNLTT ALGPSLKSDA RSIPCFELPL LLDEERLTIR IPAISFYPPA 
TGFAVMDELM TTEIPVLVVE IASSRLRRDS MSARVKGYLQ KGVQGVWVID PVTRHVHQFS 
EGLPPKMIKE TETMHGYPYF ADLHLLVMDL FADPVWLRSS GN