Gene Plim_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3292 
Symbol 
ID9140007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4250771 
End bp4251679 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content57% 
IMG OID 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003631304 
Protein GI296123526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0167734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGAAT CTGTCGCGAT TTTAGGTGGC CAGGGTCAAC TGGCTTTCGA ACTTCAGTGT 
CTCCTGGCAC CCGACTCAGG CAGATCGCTT TCGATCCTGG GAAGAGAAGA TCTTGATGTG
ACCAACGCTG CCCAGGTCGA TGCGGTGCTC TCGGGGATTC ATCCGCAGAT TGTGATCAAC
TGTGCTGCTC AGACTCAGGT CGATGTGGCT GAATCGACGA GCGAAAACAC GTTTTCCATC
AACGCGACCG GTGCGGGCCA TATCGGCAGA TGGTGCGCTG CAAATCGTGC CAAGCTGGTT
TATATCAGCA CCGATCATGT GTTTGGCCAG ACCATCGATC GGGCTCATGC GAGGCCGTGG
CGGGAAACTG ATCAACCGCA GCCCGTTTCG GTTTACGCAC GCAGCAAACT GGCTGGCGAA
CAGGCCACTC TCGAAGCCTG CCCGCACAGT GTTGTGGTGC GCACCTGTGG CCTCTATGGG
CAGCGCCCAG CAAAGGGCAA GGGAAACTTC GTTCAGACCA TGCTCAGACT GGCTCAGCAA
AGGCCTGTGC TCAAAGTGGT CGATGACCAG TGGTGTACGC CTTCATCGGC TCAAGACGTC
GCGCAAGCCA TTCGTTCACT TCTGGTCGAT CCCGATGCCT TCAACCCCAA GACCAATCTC
ACGTCACGCA TCTGGCATAT CACCAACACC GGGAGTACGA CCTGGGCTCA ACTGGCGCGT
GAGATCTTTT CACTCCAAGG CCTCACGACC GAAGTCATTC CGATCACGAC AGCCGAGTTC
AATGCCCCGG CCCACCGGCC AGGTTACAGC GTGCTCGATA CTTCTCGCTT TCATCAAAGC
TATGGAGCGC TGCCGAGTTG GCAAGAAGCA CTCGCCACTT ATCTGCAAAG GCTTCAGCGT
TCGGAATAA
 
Protein sequence
MVESVAILGG QGQLAFELQC LLAPDSGRSL SILGREDLDV TNAAQVDAVL SGIHPQIVIN 
CAAQTQVDVA ESTSENTFSI NATGAGHIGR WCAANRAKLV YISTDHVFGQ TIDRAHARPW
RETDQPQPVS VYARSKLAGE QATLEACPHS VVVRTCGLYG QRPAKGKGNF VQTMLRLAQQ
RPVLKVVDDQ WCTPSSAQDV AQAIRSLLVD PDAFNPKTNL TSRIWHITNT GSTTWAQLAR
EIFSLQGLTT EVIPITTAEF NAPAHRPGYS VLDTSRFHQS YGALPSWQEA LATYLQRLQR
SE