Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3292 |
Symbol | |
ID | 9140007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4250771 |
End bp | 4251679 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_003631304 |
Protein GI | 296123526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0167734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGAAT CTGTCGCGAT TTTAGGTGGC CAGGGTCAAC TGGCTTTCGA ACTTCAGTGT CTCCTGGCAC CCGACTCAGG CAGATCGCTT TCGATCCTGG GAAGAGAAGA TCTTGATGTG ACCAACGCTG CCCAGGTCGA TGCGGTGCTC TCGGGGATTC ATCCGCAGAT TGTGATCAAC TGTGCTGCTC AGACTCAGGT CGATGTGGCT GAATCGACGA GCGAAAACAC GTTTTCCATC AACGCGACCG GTGCGGGCCA TATCGGCAGA TGGTGCGCTG CAAATCGTGC CAAGCTGGTT TATATCAGCA CCGATCATGT GTTTGGCCAG ACCATCGATC GGGCTCATGC GAGGCCGTGG CGGGAAACTG ATCAACCGCA GCCCGTTTCG GTTTACGCAC GCAGCAAACT GGCTGGCGAA CAGGCCACTC TCGAAGCCTG CCCGCACAGT GTTGTGGTGC GCACCTGTGG CCTCTATGGG CAGCGCCCAG CAAAGGGCAA GGGAAACTTC GTTCAGACCA TGCTCAGACT GGCTCAGCAA AGGCCTGTGC TCAAAGTGGT CGATGACCAG TGGTGTACGC CTTCATCGGC TCAAGACGTC GCGCAAGCCA TTCGTTCACT TCTGGTCGAT CCCGATGCCT TCAACCCCAA GACCAATCTC ACGTCACGCA TCTGGCATAT CACCAACACC GGGAGTACGA CCTGGGCTCA ACTGGCGCGT GAGATCTTTT CACTCCAAGG CCTCACGACC GAAGTCATTC CGATCACGAC AGCCGAGTTC AATGCCCCGG CCCACCGGCC AGGTTACAGC GTGCTCGATA CTTCTCGCTT TCATCAAAGC TATGGAGCGC TGCCGAGTTG GCAAGAAGCA CTCGCCACTT ATCTGCAAAG GCTTCAGCGT TCGGAATAA
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Protein sequence | MVESVAILGG QGQLAFELQC LLAPDSGRSL SILGREDLDV TNAAQVDAVL SGIHPQIVIN CAAQTQVDVA ESTSENTFSI NATGAGHIGR WCAANRAKLV YISTDHVFGQ TIDRAHARPW RETDQPQPVS VYARSKLAGE QATLEACPHS VVVRTCGLYG QRPAKGKGNF VQTMLRLAQQ RPVLKVVDDQ WCTPSSAQDV AQAIRSLLVD PDAFNPKTNL TSRIWHITNT GSTTWAQLAR EIFSLQGLTT EVIPITTAEF NAPAHRPGYS VLDTSRFHQS YGALPSWQEA LATYLQRLQR SE
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