| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3281 |
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| Symbol | |
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| ID | 9139996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4235904 |
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| End bp | 4238651 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_003631293 |
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| Protein GI | 296123515 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCAATC CGTCACTCTT TCCCATCATT GATTTCAAGT CACCTGCCGC CAGCCAGCTC
GGCAAAATTC ATGAGAACCT TCGCCACGTC ACGGAAGACG TTATGCCAAC ATCATCATTA
AATACGGCAT TTCGCGCCAT GGCTTTGGGT TTCGCCCTGC CAGCAACACT GTTTGTCGGA
TCGGAATTCT GGCCTGCCGA ATGGAAATCG ACTCCTGTGG TTCGAGGTAG CACAGCCGCC
ACCCGCAGCG CAGCGCAGTT CCCTCAGACG GACGTGCCGC CGGCTTCAGA GACTCGTGCT
GCATCGGATA CTCGCTCGAC TCCAGCGACG ATGTCTCCAA AGGTGGTCTC GCTCTCGAAT
GTCAAACAGC CAGTGGAGCA AACAACGGCT GCAGATCGGC TCAGCTCACC GACTCAGTCG
AGCATTTCCC GACCGGCACA GTTTTCAAGA AAAATTCCCG ATTCGAGAAA CATACCCGAT
TCGAGGAACA TACCCACAGT TCCAGAACCT CACGATCTTC CCGAAGTTGA TGCTGAAGAT
CTTCCCGTCA TCAGTTTCCA TACGCTTCCC GTGGATGAGC CGCCTCTGCG GCAACCCCAT
GCCAGCAAGT CCTCGGCTCC GGCAAATCGG CAAATCGAGG CTCAGCTTTC CGGATTGGAG
CGAAAGATCG AAATGCTGGC ACAGGCCCAG ACTGATCGCC AGCAATCCGA CCTCGAGCGG
GCCCGGGCTT TGTACGACCA GATGCGGAAC AGTCAGCAAT TGCAGCAGAT CGAGAATCGG
CTCAATGAGC TCTCACTCAA ATCGACACAG GCCCAACTGA CCGCACCAGC CACTTCCACT
CAGTCGCCCG CTGTTCCAGG CGAGAACAGA TCAACTGCTG ATACCACACC TACAGCTAAT
CCCTCGAAAA ATGATCTGCT CCAACAGCCA GTACTTCCTA ATACAGCGAC ACCTTCGGAA
GGGGAATCGT TGCCGCAGAT TCGTGTGATG CCACAAATCC CTCACGGGCC GGATGGTCCT
GGGGGAAATG TTACCAGTGA TGAGAAGTTC GATCTGCAGG TGGAGCAGGC CGAACTTCCC
CGTGTGTTGG AACTGCTGGC TCAAATGGCG GGAATCAACA TTCTCACCAG CCCGGAAGTT
GTGGGAAAAG TGACTGTCAA CCTGCAGGGG GTCACTCTGG AAGCAGCGCT GGATGGATTG
TTGAGAACCC GCGGATATCT GTATCAGCGT GAAGGGGACA TGGTCTTTGT GATGACGGCT
CGCGAAGCGG AAGCCCGCCG GCTGGCTTCA CGAAAAGTGC TGACAAAGAT TTATCAGCCC
AACTACATCA ACGTGAAGGA ACTCCAGCAG CTCGTTCAAC CAATTCTGAC ACCGACACTG
GGCAAAGTTT CCATCACCTC TCCGTCTTCC GTCGGGATCG CTGAGAACGC CACCGATGCA
GGGGGTGACA GTCTTTCCCA ACGGGATGCA CTGCTGGTGC AGGATTACGA AGAGGTCATC
AACGAAATTG ATCGCGTGAT TATCGAGATG GATATTCCTC CATTGCAGGT GATCATCGAT
GCCAAAATTC TCAGTGTGAA ACTGACGGAT GACATGGCGT TTGGAGTCAA TCTGGCTTTG
TTAGGTGGAG ACAAGAATCT CGCCGTCACT GGGAACGGAG CCTCGATTGC GACCAGTAGT
GGCTTTCCTG GGGGAACGGG TTCGATCATC CCTCCGGGTG CTCAATTTCT CGCGAACACA
GCGGGGCTGA AGTATGGCTT TATTGCGGGT GACATCACCG GGTTTATCCG GGCTCTCGAA
TCGATCGCCG ATACCAGCCT CGTGGCCTCT CCACAAATTC GGGCACTCAA TAAGCAGCGG
GCCGAAATGA TCATCGGCAA TCGATTGAGC TATAAAACGT TAGCGTTCAA CAGCACTCAA
ACCATCGAAA ACGTCAACTT CCTCGAATCG GGCACCAAGC TGATTATCCG GCCGTTCATT
GCTCCCGATG GACTGGTGCG GATGGAAGTT CATCCCGAAC GATCGCGTGC TGTGATCAAT
CAGTCGACGG GATTGCCCGA TCAGGATACG ACGGAAGTCA CCACGAACGT CATGGTTCGC
GATGGGCAGA CCGTCGTCAT TGGCGGTCTC ATCAGTGAAG AATCGACAGA ATCGATTGAT
CGGGTTCCAG TTCTTGGGGC GATCCCGCTG GTGGGAGCGG CCTTTCGAAA TAAAAGCAGC
CGCATCGAAC GGACCGAGCT GATTGTGCTG ATCACGCCCC GCATTGTCGA TGAATTCGCG
GCTGCTGCCG AAGGGGATAT TTTACAGGCA GCGACGGAAG AACGGGCTGC TCACTTTCGC
GATCATCTCT CGCCCGTCAA TCGCAACAGT CTGACCAGAG CCCACTATGA AAGAGCCGCT
TTTTATCTGC AAAAGGGTGA GCTGATGCGC GCTCGCCAGC ATATTGATGC CGCACTTCAT
CAGAACAGTG CCGATCTCGA TTCGCTTCAA TTGCGCAATG AAATCAACAC TCAGATCGAA
GCCAAAACCG GGGAGATGTT CCGCTGGCCT GGTCGCAACA AAAAGAGTGC CCGGCAAGCG
GCTGCAGCGG CCATCACGCC GTCGCCGATT ACACCCACGG TATTGCTTCC TTCCACGGGC
AGCACAAGTG TCAGCCAGAC CACAGACACA TGGGTGATGC CTGCGGAACT TCCACCACCT
CCAGCGCCAG TTCAGCTTCC TCCACCAGTT CCTGCGCCGG GATTTTGA
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| Protein sequence | MTNPSLFPII DFKSPAASQL GKIHENLRHV TEDVMPTSSL NTAFRAMALG FALPATLFVG
SEFWPAEWKS TPVVRGSTAA TRSAAQFPQT DVPPASETRA ASDTRSTPAT MSPKVVSLSN
VKQPVEQTTA ADRLSSPTQS SISRPAQFSR KIPDSRNIPD SRNIPTVPEP HDLPEVDAED
LPVISFHTLP VDEPPLRQPH ASKSSAPANR QIEAQLSGLE RKIEMLAQAQ TDRQQSDLER
ARALYDQMRN SQQLQQIENR LNELSLKSTQ AQLTAPATST QSPAVPGENR STADTTPTAN
PSKNDLLQQP VLPNTATPSE GESLPQIRVM PQIPHGPDGP GGNVTSDEKF DLQVEQAELP
RVLELLAQMA GINILTSPEV VGKVTVNLQG VTLEAALDGL LRTRGYLYQR EGDMVFVMTA
REAEARRLAS RKVLTKIYQP NYINVKELQQ LVQPILTPTL GKVSITSPSS VGIAENATDA
GGDSLSQRDA LLVQDYEEVI NEIDRVIIEM DIPPLQVIID AKILSVKLTD DMAFGVNLAL
LGGDKNLAVT GNGASIATSS GFPGGTGSII PPGAQFLANT AGLKYGFIAG DITGFIRALE
SIADTSLVAS PQIRALNKQR AEMIIGNRLS YKTLAFNSTQ TIENVNFLES GTKLIIRPFI
APDGLVRMEV HPERSRAVIN QSTGLPDQDT TEVTTNVMVR DGQTVVIGGL ISEESTESID
RVPVLGAIPL VGAAFRNKSS RIERTELIVL ITPRIVDEFA AAAEGDILQA ATEERAAHFR
DHLSPVNRNS LTRAHYERAA FYLQKGELMR ARQHIDAALH QNSADLDSLQ LRNEINTQIE
AKTGEMFRWP GRNKKSARQA AAAAITPSPI TPTVLLPSTG STSVSQTTDT WVMPAELPPP
PAPVQLPPPV PAPGF
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