| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3279 |
|---|
| Symbol | |
|---|
| ID | 9139994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4234206 |
|---|
| End bp | 4234565 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_003631291 |
|---|
| Protein GI | 296123513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.589193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTC TCATTCCCTC ACCCACGCAG ATTGAAGCGG CTGGAAACAA ACCCAAGCTG
ATTCGTGAGT TCATTGGCCG CGTGAATACC CAAGAGTCTC ACATCAGTAT TGCCCACATG
CAGAGCCCTG GCGGCTGGGT GGAACCTGGG CAAACACCCG AGTTCGACGA ATACACACTG
GTTCTGAAGG GTTCGCTGCA GGTCGAATCC AATGATGGCA CGCTCTTTGT GGCAGCGGGA
CAAGCTGTGC TGGCCCGAAA GGGCGAATGG GTGCGCTACA GTACACCGGA GGAAAGTGGC
GCGGAATACA TTGCTATCTG CCTGCCCGCT TTCTCGATGG AAACTGTTCA TCGCGATTAG
|
|---|
| Protein sequence | MPVLIPSPTQ IEAAGNKPKL IREFIGRVNT QESHISIAHM QSPGGWVEPG QTPEFDEYTL
VLKGSLQVES NDGTLFVAAG QAVLARKGEW VRYSTPEESG AEYIAICLPA FSMETVHRD
|
|---|
| |