Gene Plim_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3278 
Symbol 
ID9139993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4233345 
End bp4234148 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content57% 
IMG OID 
Productdihydrodipicolinate reductase 
Protein accessionYP_003631290 
Protein GI296123512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.421535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTGA CCACAATCGG CGTTTTCGGT GCGACAGGTC GTATGGGCCA GCGAGTTCTG 
GCCTGTGCAG CGACTGATCC ATCGCTCAAG GTTTCAGCGG CTTATGAGCG TCCCACTCAT
CCAGCGATTG GTAAGGATGT CGGTGAGATT GCCGGCCTGG GTACAATCGG CGTCCCGCTT
GCGGGGGAAA TCGGGACGCC TCCCGATGTG ATTATCGATT TCTCCACGCC CGAAAGCTCG
GTCGAGCTTT CCAAGGTCTG TGCCGAGCGG GGATTGCGTC TGGTTCTGGC GACCACTGGT
TTCTCTACTG AGCAGAAAGA GGTGATTACG CAGGCGGCTC AGAAAACCGC CATTCTGTGG
GCACCCAGCA TGAGCCTGGC TGTCAATGTG GCGATGAAGC TGGTTGCTGA TGCGGGCCGC
GCTTTGAAAG ATGTTTCCAG TGGTGTCGAT GTCGAAATCA TCGAGAGGCA CCATCGCTTC
AAAGAAGATG CTCCCAGTGG AACCGCTCTC AAGTTTGGTG AAATTGTCGC ACAAGGGATG
GGGCAGACCG AGCATGTGCA TGGTCGTGAA GGCCGGATTG GCCAGCGACC TCGCAATGAG
ATCGGTTATC ACGCACTGCG CACTGGCGAT AATGTGGGCG AACACACGAT TGTCTTTGGC
CTGATGGGCG AAACTCTGGA AGTGACCGTG CGCGGGAATT CTCGCGACAG TTACGCCCAG
GGAGCATTGA CTGCTGCCAA ATTTCTGGCG GGCCGGCCGG CTGGTCTCTA TTCGATGGCC
GATGCTCTCG GATTGAATGC CTAG
 
Protein sequence
MAVTTIGVFG ATGRMGQRVL ACAATDPSLK VSAAYERPTH PAIGKDVGEI AGLGTIGVPL 
AGEIGTPPDV IIDFSTPESS VELSKVCAER GLRLVLATTG FSTEQKEVIT QAAQKTAILW
APSMSLAVNV AMKLVADAGR ALKDVSSGVD VEIIERHHRF KEDAPSGTAL KFGEIVAQGM
GQTEHVHGRE GRIGQRPRNE IGYHALRTGD NVGEHTIVFG LMGETLEVTV RGNSRDSYAQ
GALTAAKFLA GRPAGLYSMA DALGLNA