Gene Plim_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3277 
Symbol 
ID9139992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4231557 
End bp4233221 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content56% 
IMG OID 
ProductNAD+ synthetase 
Protein accessionYP_003631289 
Protein GI296123511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CTCTCCTGCA AACCAATCCC ACTGTCGGTG ATCTGGCGGG GAATGCCCGG 
CTGGTGCAGG AGGCGGCACA TATGGCAGCA TCGAGCGGGG CTGATCTGCT GGTCACCAGC
GAGCTGGTCC TTTCGGGTTA TCCACCCAAA GACCTGCTCT CGAGACAAGG ATTTGTGGCA
GCTTGCGATC GATGGGTCGA TCAACTGGCA GGGGAGCTTC CTAAGGAACT GGGTGTCGTC
GTGGGACATC CGACTCAGCG GGATTGCCCG CAGGGACGCA TTGCCAATGC TGCCAGCCTG
ATCCATGAGG GAAAAGTTCT CGCCACCATC CATAAGCGGC TCTTGCCCAA TTACGATGTC
TTCGATGAAC GGCGATACTT CCGCCCCGCT CAAAAACTGG CACCCATCCC GTTTCGTGGT
GAAAAGCTGG GAATTCATAT TTGCGAAGAT GCCTGGTTTC ATGACCCGGC TACGTTCTAT
GCGACAGACC CGGAACTGCT GGGAGACCCT GTGGCGGAAT TAGGGAAGCA GGGAGCGACT
CTGCTGATTA ATCTCTCAGC CAGCCCGTTC GAAGTCGGCA AGTCGCGGCG GCGTCATGAA
CTGATGGCCT ATCATGCCCG GCACTGGTCG ATTCCGTTTC TCTTTGCCGA TCAGATTGGC
GGCAATGACG ATCTTGTATT CGACGGGCAG AGTTTTGTTC TCGATGCGAA TGGGTCGTGT
GTGGCGACGT TGCCCGCTTT TCGAAGGGGC TTGTTGCAGG TTGATACCCA GGCACTTCCT
CCGCGGCAGA TTTCTCTGCA GATGCCCGTC GAGTCTGATC TTCATGAAGC TATGGTGCTG
GGCATTCGCG ATTATTGCCA TAAGTCGGGT TTCACGGATT GCGTTCTGGG GCTTTCTGGA
GGTGTGGATA GCGCGCTCGT CGCGTATCTG GCAGCCAGAG CTTTGGGGCC GGAACATGTT
CATGGCCTGC TGCTTCCCAG CAGATACAGC ACAGACCATA GCCTGGAAGA TGCCATCCTG
CTGGCAGAAC GATTGAAAAT CGATCATTGC ACCATCCCCA TCGATGCTGT GCACCGGGCG
TATGAAATGA TTGCAGTGCT GGGAGAGGAG CTGGCATCTA AGCCAGCGGG GCTGGCTGAT
CAGAATCTGC AGTCACGAAT TCGTGGTGCC ATTGTGATGG CACGCAGCAA TCATCACGGC
TGGCTGGCTC TGGCGACAGG CAATAAGAGT GAACTCGCCA TGGGGTATTG CACACTCTAT
GGCGATATGA ACGGTGCTCT CGCACCCTTG AGCGATTTGT ACAAAGGCGA GGTCTATCGG
CTTTGCGAGT TCATTAACCA ACAGGAAGGG AAGGAGATCA TTCCGGCGAA CATTCTCACA
AAACCTCCTT CCGCAGAGCT GGCCCCCAAC CAGTTCGATC AGGACACGCT TCCCCCCTAC
GACATGCTGG ATGACATTCT GCGGGGCCTG ATTGACCGGG AAGAATCTGT GGCGGCTCTC
AGCGATAAGT TCCCCGCGAC GACAGTCGAG TGGGTCGCCA GACGACTGGA TCGGAACGAG
TACAAACGCT GGCAGATGCC ACCGGGGATT AAAGTCTCAC CACGCGCCTT TGGGGTTGGT
CGTCGCATGC CGATGGCGGC CAGGTGCGAT GGTGACTGGG CATGA
 
Protein sequence
MKIALLQTNP TVGDLAGNAR LVQEAAHMAA SSGADLLVTS ELVLSGYPPK DLLSRQGFVA 
ACDRWVDQLA GELPKELGVV VGHPTQRDCP QGRIANAASL IHEGKVLATI HKRLLPNYDV
FDERRYFRPA QKLAPIPFRG EKLGIHICED AWFHDPATFY ATDPELLGDP VAELGKQGAT
LLINLSASPF EVGKSRRRHE LMAYHARHWS IPFLFADQIG GNDDLVFDGQ SFVLDANGSC
VATLPAFRRG LLQVDTQALP PRQISLQMPV ESDLHEAMVL GIRDYCHKSG FTDCVLGLSG
GVDSALVAYL AARALGPEHV HGLLLPSRYS TDHSLEDAIL LAERLKIDHC TIPIDAVHRA
YEMIAVLGEE LASKPAGLAD QNLQSRIRGA IVMARSNHHG WLALATGNKS ELAMGYCTLY
GDMNGALAPL SDLYKGEVYR LCEFINQQEG KEIIPANILT KPPSAELAPN QFDQDTLPPY
DMLDDILRGL IDREESVAAL SDKFPATTVE WVARRLDRNE YKRWQMPPGI KVSPRAFGVG
RRMPMAARCD GDWA