| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3272 |
|---|
| Symbol | |
|---|
| ID | 9139987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4222520 |
|---|
| End bp | 4223944 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003631284 |
|---|
| Protein GI | 296123506 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTAG TTGTCTTTGG GCGTCTCTTG AAGAAGTACG ATATGACGCA AATCACTCGA
GAACTTACCT TTAGTCAATC GCTCATTCTC ATCTTCAAGA TTTCGATGTT ATTGCAGTGT
CTTACTCTTA ACACTGTGGC CCAGGCCACT GACCAGGCTT GTCTGGTCGT GGAAATTTCT
TCGGGCCAAG TCGATCGGGC AGCGATGCCA CTATGTGTTG AAGTACCTGC GGCACTGCAA
AAGGCGAAAG AGCTTTCATT AAGGGAGGTC ACAGGGAGTG GTGATGCTGC CATCGGTAAG
TCTATTCCCT GCCAGATTGA AGCAGGTTCG CCGCTGAAGG TCTGGTGGAT GCTTGATCAT
CTTCCGGCTG GCGAAACTCG GAGGTATCGG CTTACTGCGG TTGATTCTGA CAATTCAAAA
GCTGAAGACG GCACCAATGC TCCCGCTCCC GACATGACCG CTGCTGTTGA TGGGCAGGCT
TTGGCCATCT CGGTCGAAGG CTTGCCAGTC CTCAAGTATC AGCAGGCGGT CATGCCCTCG
GCTGATCCTG CCAAGCCGTT CTATGCTCGC AGCGGGTTTA TTCATCCAAT CTTTGACCCG
GCTGGCCGCG CGGTCACGGA GGCGATGCCC GCTGACCATA TGCATCAGCA CGCCCTCATG
TTCGCCTGGG TGAATGCCGA GTTTGAGGGC CGCAAGGTTG ATTTCTGGAA CAGTCATAAA
GAGCAGGGGC TTGTCCGGAA TGTGCGTTTG GACGATGTCC AGGTGGGCCC GGTCTTTATC
CGCTTCAAAG CCCGTCTCGA ACATGTGGAT CAGACTCCGG AAGACGGCCC TCGAGTCGCA
CTGCATGAGG TTTGGGAAGT CAAAGTGTTC CATCGAACGG ATGGATTTCT CTTCGACTGG
CAATCGACCC TCACCTGTGC GACGGAGTCT CCTCTCAAAC TCTTGAAGCA TGATTACGGT
GGCTTATGCC TGCGTGGACG CGACGAGTGG AATATCGCCG ACGGTGGCGA ATTCCTGACC
AGCGAAGGCA AAACACGAGC CAATGGGAAC CATACGCGGC CTCACTGGTG CGATCTTTCC
GGCCCTTTCC CAGTCACTCC CGTCCCTCAA TCGCCGGCAG CATTAAAGGC GACTCCAGCG
ATAAACGGTA CCCAAGAGCC AGCGACGTCA CCTGCTCCCT GGGGCGGGAT TGCGGTTCTC
GACCATCCGT CGAATTTTCG CTTCCCGCAA CCTGTCCGGC TGCATCCCAA CATGCCTTAC
CTTTCGGTCA CACCGGCACC TTTGGGCCCT TTTGAGATCG AACCGGGGAA GCCTTATGTC
ACCCGCTTTC GATTTTTCAC ACATACGGGC AAGCCTGAGG CCGCCGTCAT CGACCAGCTC
TGGGCGGATT ACGCACAGCC TGTGGCCAGC CGGGTGATTG AGTAG
|
|---|
| Protein sequence | MMLVVFGRLL KKYDMTQITR ELTFSQSLIL IFKISMLLQC LTLNTVAQAT DQACLVVEIS
SGQVDRAAMP LCVEVPAALQ KAKELSLREV TGSGDAAIGK SIPCQIEAGS PLKVWWMLDH
LPAGETRRYR LTAVDSDNSK AEDGTNAPAP DMTAAVDGQA LAISVEGLPV LKYQQAVMPS
ADPAKPFYAR SGFIHPIFDP AGRAVTEAMP ADHMHQHALM FAWVNAEFEG RKVDFWNSHK
EQGLVRNVRL DDVQVGPVFI RFKARLEHVD QTPEDGPRVA LHEVWEVKVF HRTDGFLFDW
QSTLTCATES PLKLLKHDYG GLCLRGRDEW NIADGGEFLT SEGKTRANGN HTRPHWCDLS
GPFPVTPVPQ SPAALKATPA INGTQEPATS PAPWGGIAVL DHPSNFRFPQ PVRLHPNMPY
LSVTPAPLGP FEIEPGKPYV TRFRFFTHTG KPEAAVIDQL WADYAQPVAS RVIE
|
|---|
| |