| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3264 |
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| Symbol | |
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| ID | 9139979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4214580 |
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| End bp | 4215575 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003631276 |
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| Protein GI | 296123498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.26961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGTC CTGTCACGCT CTTTACCGGC CAGTGGGCCG ACCTCAAGCT GGAAGATCTT
TGCAAGAAAG CTCGGGACTT TGGTTTTGAT GGTCTCGAAC TCGCCTGCTG GGGTGACCAC
TTTGAAGTGG ATAAGGCCCT TTCCGATGAC GGCTATTGCC AGCGGAAGCG TGACTTGCTC
GAAAAGTACG ACCTGCATGT GTTCGCGATC TCGAACCATC TCGTGGGCCA GGCTGTCCTC
GACAAGATTG ACGCTCGGCA CAAATCGATT CTTCCCGCCT ACGTCTGGGG CGATGGACAG
CCGGAAGGTG TCAATCACCG TGCGGCGGAA GAAATGAAAA ACACGGCTCG CGCTGCCCGC
AAGCTGGGTG TCAGTGTGGT GAATGGCTTT ACCGGTTCCA GCATCTGGCA CCTGACTTAC
GATTTTCCTC CCACACCCAA ATCGATGATC GATGATGGAT TCCAGCTTCT GGCCGACCGC
TGGAACCCGA TTCTCGATGT CTTCCAGGAA TGCGGCGTCA AGTTCGCACT GGAAGTTCAC
CCCACAGAGA TTGCTTTCGA TATCTATACC GCTGAGCGAT CTCTGCAGGT GCTCGACCGC
AGGGAAGAAT TCGGCTTCAA TTTCGATCCC AGCCACCTGA TCTGGCAAGG GGTGGACCCC
GTCGAATTCA TCCGCGCCTT CCCGGATCGT ATCTATCATG CCCATATGAA GGATGCCAAA
GTCACACTCA ATGGCAAGAG TGGCATTCTT TCCAGCCACC TTTCGTTTGG TGATTCCCGG
CGGGGCTGGG ATTTCCGCAG TGTGGGCCGT GGTGGTGTGC AGTTTGAAGA CATTATTCGC
GCTCTGAATC ACATCAAGTA CGAAGGCCCG CTTTCGATTG AATGGGAAGA CAGTGGCATG
GATCGCGAAC ATGGTGCCCG CGAAGCGTGC CAGTACGTGA AGAATGTCGA TTTCAAACCC
AGCGGCCGGG CCTTCGATGC GGCCTTCAGC GACTGA
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| Protein sequence | MSRPVTLFTG QWADLKLEDL CKKARDFGFD GLELACWGDH FEVDKALSDD GYCQRKRDLL
EKYDLHVFAI SNHLVGQAVL DKIDARHKSI LPAYVWGDGQ PEGVNHRAAE EMKNTARAAR
KLGVSVVNGF TGSSIWHLTY DFPPTPKSMI DDGFQLLADR WNPILDVFQE CGVKFALEVH
PTEIAFDIYT AERSLQVLDR REEFGFNFDP SHLIWQGVDP VEFIRAFPDR IYHAHMKDAK
VTLNGKSGIL SSHLSFGDSR RGWDFRSVGR GGVQFEDIIR ALNHIKYEGP LSIEWEDSGM
DREHGAREAC QYVKNVDFKP SGRAFDAAFS D
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