Gene Plim_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3257 
Symbol 
ID9139972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4210155 
End bp4211447 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content57% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003631269 
Protein GI296123491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGT CACTGACGTT GCTGATTGCC ATCCTCTGGT CGTCAGCAGC CGATTTGACC 
TGGGCCCAGT CCGTACCAAC AGACAATGCC TCTCCCATTA CGCCCTCAGC AACAACCACG
GCGACGGCTA CAGGCACCGC CAGAGCGGCA GAAACCTGGG AGATTGCTGC ACCCGATTTT
CTCCCTCTCA GTCAGAAAAT TTCAGCCAGC CTCAATCAAG CGATCGAACG GGGAGAGATC
CCTGGCGCCG TCGTGATCGC GGGCACGCTC GATGAAACTC TGCTGCATGG CGCTGTCGGC
GATCGAATCC TTTCGCCTGA GAAAATCCCC CTGCGCCCCG GCGATGTGTT TGATCTGGCG
TCGTTAACCA AGCCACTGGC CACCAGCCTG GCCGTCATGA AGCTCGTCGA TCATGGAAAG
CTCGAACTCG ATCAGCCCGT CGCAAAATAC TGGCCCGAGT TCAAACAAAA CGGCAAAGAA
GCCATTACTT CCATCGATCT GCTGGTCCAT CGTTCCGGGC TGATTGCCGA TAACGCACTG
GCCGATTATG CCCAGGGGCC AGAGGTCGCC TGGCAGAAAA TGGCGAATTT GCCATTACGT
CAGCCTGCAG GCACCCGGTT TGTCTATTCC GATGTCGGCT TGATGGTGAT GGGCCGGGTG
GTCGAAAAGA TCAGTGGCAA GTCCCTCGCT GAGTTTTGCG CACAGGAACT CTATCAGCCT
CTCGCTCTCA AGCGAACCAG ATACCTTCCA TCAGCCGCCT GGGCCGATCA ACTGGTCCCA
ACGGAAGGGC CCATCGGCAC CGTGCACGAT CCCCGCGCTG CCCGGCTGGG TGGTGTTGCC
GGTCATGCGG GCTTGTTCTC CGATGCTCAG GGCATCGCCG TACTATCGCG AGCCATTCTG
GTTTCGCTTC AAAATAAAGA CTCTTCAGCG GCCAACATGC CTCGAATCTT CACTCCAGTC
ACTGCCCGGC TGATGGTCAC ACCCGTTGAA GTTCCTGCGA TCAGCTCCAA CACGCCGACG
ACTGTTCACA GAGCTTTAGG TTGGGACATG CGCTCGACCT ACTCCTCGAA CAGACCGACG
AAAATGTCCG ACAGCGCCTT TGGTCATGGC GGGTTTACCG GCACATCGCT CTGGATTGAC
CCCCAGCGAA AACTGTTCGT CTGCATTCTT TCCAGCAGGC TCTATCCCGA TGGCAAAGGA
GTCATCAATC CCCTCGCCCG TGAAATCGGC GATCTGATTG TCGAACAGTT CGATGCGCGA
ACCACGAGGC CAACACCTGA AACTCCTCAG TAA
 
Protein sequence
MKKSLTLLIA ILWSSAADLT WAQSVPTDNA SPITPSATTT ATATGTARAA ETWEIAAPDF 
LPLSQKISAS LNQAIERGEI PGAVVIAGTL DETLLHGAVG DRILSPEKIP LRPGDVFDLA
SLTKPLATSL AVMKLVDHGK LELDQPVAKY WPEFKQNGKE AITSIDLLVH RSGLIADNAL
ADYAQGPEVA WQKMANLPLR QPAGTRFVYS DVGLMVMGRV VEKISGKSLA EFCAQELYQP
LALKRTRYLP SAAWADQLVP TEGPIGTVHD PRAARLGGVA GHAGLFSDAQ GIAVLSRAIL
VSLQNKDSSA ANMPRIFTPV TARLMVTPVE VPAISSNTPT TVHRALGWDM RSTYSSNRPT
KMSDSAFGHG GFTGTSLWID PQRKLFVCIL SSRLYPDGKG VINPLAREIG DLIVEQFDAR
TTRPTPETPQ