Gene Plim_3253 details

Gene Information

• Locus tag: Plim_3253
• ID: 9139968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4206424
• End bp: 4207185
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 53%
• Product: Endonuclease/exonuclease/phosphatase
• Protein accession: YP_003631266
• Protein GI: 296123488

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.378001
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGATCG TCAGCTTCAA CATTCACAAA GGGATCGGCG GACGTGATCG ACGATATCGC 
CTCGAACGAA TCATTGAGGC ATTGCGTGCA CTAGAACCCG ATGTGATCTG CCTGCAGGAA 
GTGGACCATC ATGTGGCGAG ATCACGCTAC GACCATCAGG CCAAACTCAT TAGTGAAGCA 
CTGGGTCTGG TGCATGCGCA CTATCAGTTG AATGTGCGTC TCAAAGAAGG CGGTTATGGG 
AATCTCATTG CTTCGCGTTA TCCGCTGGCT TCGGTGCATG CCATTTCACT CACCCGGCGA 
CATTACAAGC CGAGGGGTGC GCAACTGGTC GTTGTCCAGA CTCCGTTAGG CAGGCTGCAT 
CTGATTCACT GGCATCTGGG ATTGCGTGAA ACCGAGAGGC ATTGGCAGGT TCGTCGGATG 
TTTGAACATC AGCATTTTCG CGAACACAGA CAATTACCGG CTATTGCGAT TGGCGATACG 
AACGACTGGC GGAACACACT GGCCAACGGC CCGTTTGCAG TGCATGGCTG GAAACAGATT 
TCCAGCCCAC CTTCCCGATT TCGATCTTTC CCGGCGTGGC TTCCTTTAGG AGCACTGGAC 
AAAGTGTTTG TGAATTCGGG AGTGGCCATC GAGAGTTGTC ATATTGCCAA AAGCCGACTA 
TTGAGAGATG CCTCGGATCA TCTGCCGCTG GTGGTTGATC TAGGTGGTTT TCATGAACAC 
CCGGCGGATC ATTTGCCGCG ATTGAGTCTT CCTGTTCAAT GA 

 

Protein sequence

MRIVSFNIHK GIGGRDRRYR LERIIEALRA LEPDVICLQE VDHHVARSRY DHQAKLISEA 
LGLVHAHYQL NVRLKEGGYG NLIASRYPLA SVHAISLTRR HYKPRGAQLV VVQTPLGRLH 
LIHWHLGLRE TERHWQVRRM FEHQHFREHR QLPAIAIGDT NDWRNTLANG PFAVHGWKQI 
SSPPSRFRSF PAWLPLGALD KVFVNSGVAI ESCHIAKSRL LRDASDHLPL VVDLGGFHEH 
PADHLPRLSL PVQ