Gene Plim_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3231 
Symbol 
ID9139946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4171450 
End bp4172610 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631244 
Protein GI296123466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.91034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAA TTGTCGATCG TTCGGATCCT TTGTCCTCTG CTGAGTTTGT GACAGTTGAC 
CCTGCGATGG CAGCACTGGT CGACAGGCGT CATCGCAAAA TTGCCGACTG GCTCAAATCT
CATCAGTTCG ACGCTGCGTT GCTGACGGAT CCCGCCAATC AGTCGTGGCT TTCGGCGGGT
GCCGATTTTT CTGGTGCCGA GATGTCCGGC CCATCGACGG CGATGTTCGT GACTCCCGAA
TCGCGTGTGA TTGTCTGCCA TAACGTGGCC TCTTCTCGAG TGTTCGAAAC CTGTATTGGT
GGCATGGGAT TCCAGATCAA AGAGCGTCCG TGGTACGAAC CACTTGAAGT CTTATTGGCG
GATTTGTGCC GTAGCCGGAA GGTGGTGCTG GATCGCTTTG GCCCATTGGG CGAAGCCCGC
ACAGAGGCAT TTCGTAATTT TCGCTGGCCA CTCGATGACC ACGATGTGGA ACAGCTCAAA
ATGGGTTCAA AAATCATAAC TCATGCCGTT GAAGCGACTT GCCGCGGCTG GTATCCGGGA
AAACGGGAAT GCGAACTGGC TGGCGAAGTA TCTCATCGCC TGCTCAAGCA CGAAGTCACT
CCTGTCCGTG TGCAGATACT CGCTGATGGC CGGGCCAGAC GTTTCCGCGA CTGGGCGTGG
TCTGAAGATG AAACCACCAG TACAGTCACG ATCGTTGCAA TTGGTCGCTA CAAAGGGATG
CATTGTGGAG TCAGCCGGAC GGTTCTCGAT GGGCCGCTGG AAGGAAGTTT TGCCGAAGCC
TGGGAAAAGC TGGCACTGGT GCTGGGGACA GCCATGTTTT TCTCACTGGG CAGCACGCCA
TTGAGCCAGA TTTGGGGCAA AGTCGCTCGC ATTTACGAAA AATTTGGCTG TGCGGATGAA
TGGGAAATGG CTCCTCAAGG AGAGCTGCTC GACTACGGCC GCATTTCGGC ACTGATTACG
CCACAATCCA AAGTCGCTGT CCCCGCGCGC GGAGCTATTT TCTGGCGACC GTCGATTTCC
ATGGCGATGG CGGGAGAAAC TGTTCTGGCA ACGGAAGAAG GAGCCCGAGT CCTCACTCAC
AGCGGCGACT GGCCCACCTG GGATGTCGAA ATCAAAGGGA GCCACGTCCC GGTCACAGCG
ATTCTCAGCC GCAGCGAATA A
 
Protein sequence
MATIVDRSDP LSSAEFVTVD PAMAALVDRR HRKIADWLKS HQFDAALLTD PANQSWLSAG 
ADFSGAEMSG PSTAMFVTPE SRVIVCHNVA SSRVFETCIG GMGFQIKERP WYEPLEVLLA
DLCRSRKVVL DRFGPLGEAR TEAFRNFRWP LDDHDVEQLK MGSKIITHAV EATCRGWYPG
KRECELAGEV SHRLLKHEVT PVRVQILADG RARRFRDWAW SEDETTSTVT IVAIGRYKGM
HCGVSRTVLD GPLEGSFAEA WEKLALVLGT AMFFSLGSTP LSQIWGKVAR IYEKFGCADE
WEMAPQGELL DYGRISALIT PQSKVAVPAR GAIFWRPSIS MAMAGETVLA TEEGARVLTH
SGDWPTWDVE IKGSHVPVTA ILSRSE