Gene Plim_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3220 
Symbol 
ID9139935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4158338 
End bp4159525 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631233 
Protein GI296123455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGCGAC AAGAGCATGT ATTGACTGTG TTCGTGGCTT CACCAGGTGA CGTCGAGACT 
GAACGCGGAA AGATTGAAGA CGCAATTCGT GAATTAAATA TTTCTTGGAG CCGTGAACTG
GGTGTTCGTC TCGATCTCGT GCGATGGGAA ACCCACGCAT ACCCAGGATT CGGCGTCGAC
GCTCAAGATG TAATTAACGA ACAAATTCCT GAAGACTACG ACCTCTTTGT TGGAATCATG
TGGTGTCGAT ATGGAACCCC CACTGGACGT GCGGGATCGG GGACGGTTGA AGAATTCGAG
CGTGCTAAAG CCCGTTACGA TGCGGACAAA AACTCCGTTC AGCTGATGGT CTACTTCAAA
GATGAACCTA TACCTCCGAG CCAATTGGAT CCCGCACAAC TTGCGAAAGT CAATAGCTTC
CGGAGTTCTC TGGGCAATGA AGGAGGGTTG TATTGGAAGT TTACAGACAT CGATCATTTT
GAAAAACTGA TTCGACTGCA CCTAACCCGG CAGGTCCAAG CATGGAAATC TCGGCAGACT
TCGCAAGACA CGTCCATAAA CTATGGACAC TCGCCAAACG AGGCCGACAA ACCGTCTGAC
GAACATGACG ACGATGGAAT CCTCGACCTG ATGGAGGTGT TTCAAGACAA GTTCGCGGAA
CTTCTTGAAA TAATACAACG AATTACGACG GCAACGGAAG ATGTCGGCAC GAAAATGACG
CAGCGAGCCG CTGAGATGAA CTCGCTTCGT AGAGATCCCA AGGGCAATAT AAACACAAGA
GAAGCCAAGC GAATTATATC TAAGGCGGCA ACGGACATGA ACCAATTCAC GGCTCGAATC
GATGCTGAAT TGCCTTTCTA CAACGATGCC ATGAACACTG GAATGAATTC GTTTATCAAA
GCCGCAACTA TGTCTGTAGA TTTGGAAAAC GACACAGAGG AGTTACAACA GGGGTTGGAT
GCAGTGATAT CCTTGCGAAG CAGTCTTGCG ACATCAAGAC AATCTACAGT TACGTTTCGC
GAGTCTATTG CTTCACTGCC ACGAATGACG ACCACATTTA ACAAGGCAAA ACGTGGAGCT
GTTGCAGCGA TTGATAGGCT ATTGGGCGAG TTCACTAATA GCGATCAGTT GTTAGTGGAA
TCCGAAGAGG TGATTCGAGA ATTGCTCGAT GAACCAGACG GCCCATAA
 
Protein sequence
MVRQEHVLTV FVASPGDVET ERGKIEDAIR ELNISWSREL GVRLDLVRWE THAYPGFGVD 
AQDVINEQIP EDYDLFVGIM WCRYGTPTGR AGSGTVEEFE RAKARYDADK NSVQLMVYFK
DEPIPPSQLD PAQLAKVNSF RSSLGNEGGL YWKFTDIDHF EKLIRLHLTR QVQAWKSRQT
SQDTSINYGH SPNEADKPSD EHDDDGILDL MEVFQDKFAE LLEIIQRITT ATEDVGTKMT
QRAAEMNSLR RDPKGNINTR EAKRIISKAA TDMNQFTARI DAELPFYNDA MNTGMNSFIK
AATMSVDLEN DTEELQQGLD AVISLRSSLA TSRQSTVTFR ESIASLPRMT TTFNKAKRGA
VAAIDRLLGE FTNSDQLLVE SEEVIRELLD EPDGP