Gene Plim_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3218 
Symbol 
ID9139932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4154869 
End bp4156761 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content55% 
IMG OID 
ProductStage II sporulation E family protein 
Protein accessionYP_003631231 
Protein GI296123453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.717708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAGTC TGAAGGTCAT TAAAGGGCCG GTTGTTGGTC AGATCGTCGA GTTGCGTGAG 
CCTCGCATGA TTCTGGGTCG GCACGCGACA AGCCAGATCG TGCTGGATCA CCAATCGGTC
AGCCGGCATC ACGCACAGAT CTTGCGAGAG CATGGCCAAT ATCGGGTTGA AGATCTTCGT
AGTCTGAATG GAACGCACGT CAATCATGAA TTGATCCCCG GCCCGCGCGA GTTACGGGAT
GGTGATCTTC TGCGCATCTG TGACTTCGTC TTCGAATTTC AGGCAGGCCC GTTAACACGC
CGGATGAGGC CGCGAGATTT GGGCAGCCGG TCTGCTGATG GAGAGCAGGG CGGGTTATCT
TCTGTTTCGA ATGAATCGAT CGACCTGACA GAATCTGGTC GCTCGAAGAT CGCCAGGTCG
GAAAGCGGCA AAAATTCCGC CAAGCCTGCC GGGCGGCAGA CGATTCCCGA GACCAGCGAT
GAACCTTTCG CAGGCATGGG CGGCGAAGAT GGCAGTTCGT CGATTATTTC GACGTTAGAT
GCAGCCACAG GGCATGGCAT TCGAATTAAC GTCCGACCGG AAGTGAAGCT CAAGTCGATT
CTGGAAATTG CATCGGCATT GGGCGGCATG CTCGATATCG AGGATGTTCT GCCGGCTGTA
CTGAGAGCGT TATTTCGCAT TTTCCCGCAA GCCGAGTATG GCTTCTTCCT CTTGCGAAGT
GACGACGAAG CCGAGGGGAG TCCTGCATGG GATCACAATC CTGCAGAGCG GCTGGCCATC
CGCGCAACGT GGTCGCGAAT GGGAGATCAG CAGGAATTCG TGCCAGTGAG CATGACCATC
ATCAACAAGG CCCTGGAAAC CGGGCAGGCC ATACTTTCGG CTGATGCTTC GGAAGATGGA
AGATTTCAGC GGAGTGAATC GCTGGCCTCG ATGAAAATTC GCTCCGTGAT GTGCGTGCCA
TTGATGCGAA GTAACACTCA GACTTTAGGC GTGATTCAAT TAAGCACGCT GGATCTCATG
CAGCCATTTG GCGATGAAGA TCTGGAATTG CTGGTGAGCG TCAGTAAGCC CGTCACGCTA
GCGCTGGAAA ATGCCGCGAT GCATGAGGCC GTGGTGCGCC AGCGGGAGAT GGATCGCGAG
CTGCAGTTTG CGGCACAGGT ACAACTCGGA TTTCTGCCCT CATCGAAGCC CACCCTGCGT
GGCTGGAGAT TCGCCGATTT TTATGAAGCA GCCCGTAAAG TCGGGGGCGA TTACTTTGAC
TATATACCAC AGCCACCAAA GTCGGGTTGT GATGAACTCG CTGTTGCGAT TGCGGATGTC
GCGGGGAAAG GAGTACCCGC TGCATTACTC ATGGCAAGAC TTTATGCAGC GACCCGCTAC
CGGGTGATCG CAGAAGCGAA CTGGCCGGAT GTGATGCGGG CACTCAATGG AGAAATGAGT
GCCGGTGGCC TGGGGCATCG CTTTGTGACG ATGCTGATGG TGATTATCCG CCCTGAAAGC
GGTACGGGAA AGGTGGTGAA TGCCGGTCAT TTACTACCGC TGATTCGTCG GAAGTCGGGC
GAGGTCGAAC TATTGGGACT GAAGGCTTCG GGAATGCCTT TGGGGTTAGC ACCTCTCGAA
ACGATTTATA ACGAACTCGA GTTCCACCTA GAACCCGGCG AAATGATCGT GATCTATACC
GATGGCGTGA CCGAAGCTAT GAATGCCGAA GAAGAGATGT TCGGTCGCGA TCGCATTGTG
GCCATGCTCA AAGAGCAGGA ATGGAAAGCC GAAGAGTTTG TAGCCAATCT GGTCGAAAGG
ATTGAGGCCT TCGCCGATGA TCGATCGCAA CGCGATGATC TGTGCATCGT CGCCATGCAG
TATGCTCCTG AGATGACGGA TACAGGAGTT TGA
 
Protein sequence
MASLKVIKGP VVGQIVELRE PRMILGRHAT SQIVLDHQSV SRHHAQILRE HGQYRVEDLR 
SLNGTHVNHE LIPGPRELRD GDLLRICDFV FEFQAGPLTR RMRPRDLGSR SADGEQGGLS
SVSNESIDLT ESGRSKIARS ESGKNSAKPA GRQTIPETSD EPFAGMGGED GSSSIISTLD
AATGHGIRIN VRPEVKLKSI LEIASALGGM LDIEDVLPAV LRALFRIFPQ AEYGFFLLRS
DDEAEGSPAW DHNPAERLAI RATWSRMGDQ QEFVPVSMTI INKALETGQA ILSADASEDG
RFQRSESLAS MKIRSVMCVP LMRSNTQTLG VIQLSTLDLM QPFGDEDLEL LVSVSKPVTL
ALENAAMHEA VVRQREMDRE LQFAAQVQLG FLPSSKPTLR GWRFADFYEA ARKVGGDYFD
YIPQPPKSGC DELAVAIADV AGKGVPAALL MARLYAATRY RVIAEANWPD VMRALNGEMS
AGGLGHRFVT MLMVIIRPES GTGKVVNAGH LLPLIRRKSG EVELLGLKAS GMPLGLAPLE
TIYNELEFHL EPGEMIVIYT DGVTEAMNAE EEMFGRDRIV AMLKEQEWKA EEFVANLVER
IEAFADDRSQ RDDLCIVAMQ YAPEMTDTGV