Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3218 |
Symbol | |
ID | 9139932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4154869 |
End bp | 4156761 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | Stage II sporulation E family protein |
Protein accession | YP_003631231 |
Protein GI | 296123453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.717708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAGTC TGAAGGTCAT TAAAGGGCCG GTTGTTGGTC AGATCGTCGA GTTGCGTGAG CCTCGCATGA TTCTGGGTCG GCACGCGACA AGCCAGATCG TGCTGGATCA CCAATCGGTC AGCCGGCATC ACGCACAGAT CTTGCGAGAG CATGGCCAAT ATCGGGTTGA AGATCTTCGT AGTCTGAATG GAACGCACGT CAATCATGAA TTGATCCCCG GCCCGCGCGA GTTACGGGAT GGTGATCTTC TGCGCATCTG TGACTTCGTC TTCGAATTTC AGGCAGGCCC GTTAACACGC CGGATGAGGC CGCGAGATTT GGGCAGCCGG TCTGCTGATG GAGAGCAGGG CGGGTTATCT TCTGTTTCGA ATGAATCGAT CGACCTGACA GAATCTGGTC GCTCGAAGAT CGCCAGGTCG GAAAGCGGCA AAAATTCCGC CAAGCCTGCC GGGCGGCAGA CGATTCCCGA GACCAGCGAT GAACCTTTCG CAGGCATGGG CGGCGAAGAT GGCAGTTCGT CGATTATTTC GACGTTAGAT GCAGCCACAG GGCATGGCAT TCGAATTAAC GTCCGACCGG AAGTGAAGCT CAAGTCGATT CTGGAAATTG CATCGGCATT GGGCGGCATG CTCGATATCG AGGATGTTCT GCCGGCTGTA CTGAGAGCGT TATTTCGCAT TTTCCCGCAA GCCGAGTATG GCTTCTTCCT CTTGCGAAGT GACGACGAAG CCGAGGGGAG TCCTGCATGG GATCACAATC CTGCAGAGCG GCTGGCCATC CGCGCAACGT GGTCGCGAAT GGGAGATCAG CAGGAATTCG TGCCAGTGAG CATGACCATC ATCAACAAGG CCCTGGAAAC CGGGCAGGCC ATACTTTCGG CTGATGCTTC GGAAGATGGA AGATTTCAGC GGAGTGAATC GCTGGCCTCG ATGAAAATTC GCTCCGTGAT GTGCGTGCCA TTGATGCGAA GTAACACTCA GACTTTAGGC GTGATTCAAT TAAGCACGCT GGATCTCATG CAGCCATTTG GCGATGAAGA TCTGGAATTG CTGGTGAGCG TCAGTAAGCC CGTCACGCTA GCGCTGGAAA ATGCCGCGAT GCATGAGGCC GTGGTGCGCC AGCGGGAGAT GGATCGCGAG CTGCAGTTTG CGGCACAGGT ACAACTCGGA TTTCTGCCCT CATCGAAGCC CACCCTGCGT GGCTGGAGAT TCGCCGATTT TTATGAAGCA GCCCGTAAAG TCGGGGGCGA TTACTTTGAC TATATACCAC AGCCACCAAA GTCGGGTTGT GATGAACTCG CTGTTGCGAT TGCGGATGTC GCGGGGAAAG GAGTACCCGC TGCATTACTC ATGGCAAGAC TTTATGCAGC GACCCGCTAC CGGGTGATCG CAGAAGCGAA CTGGCCGGAT GTGATGCGGG CACTCAATGG AGAAATGAGT GCCGGTGGCC TGGGGCATCG CTTTGTGACG ATGCTGATGG TGATTATCCG CCCTGAAAGC GGTACGGGAA AGGTGGTGAA TGCCGGTCAT TTACTACCGC TGATTCGTCG GAAGTCGGGC GAGGTCGAAC TATTGGGACT GAAGGCTTCG GGAATGCCTT TGGGGTTAGC ACCTCTCGAA ACGATTTATA ACGAACTCGA GTTCCACCTA GAACCCGGCG AAATGATCGT GATCTATACC GATGGCGTGA CCGAAGCTAT GAATGCCGAA GAAGAGATGT TCGGTCGCGA TCGCATTGTG GCCATGCTCA AAGAGCAGGA ATGGAAAGCC GAAGAGTTTG TAGCCAATCT GGTCGAAAGG ATTGAGGCCT TCGCCGATGA TCGATCGCAA CGCGATGATC TGTGCATCGT CGCCATGCAG TATGCTCCTG AGATGACGGA TACAGGAGTT TGA
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Protein sequence | MASLKVIKGP VVGQIVELRE PRMILGRHAT SQIVLDHQSV SRHHAQILRE HGQYRVEDLR SLNGTHVNHE LIPGPRELRD GDLLRICDFV FEFQAGPLTR RMRPRDLGSR SADGEQGGLS SVSNESIDLT ESGRSKIARS ESGKNSAKPA GRQTIPETSD EPFAGMGGED GSSSIISTLD AATGHGIRIN VRPEVKLKSI LEIASALGGM LDIEDVLPAV LRALFRIFPQ AEYGFFLLRS DDEAEGSPAW DHNPAERLAI RATWSRMGDQ QEFVPVSMTI INKALETGQA ILSADASEDG RFQRSESLAS MKIRSVMCVP LMRSNTQTLG VIQLSTLDLM QPFGDEDLEL LVSVSKPVTL ALENAAMHEA VVRQREMDRE LQFAAQVQLG FLPSSKPTLR GWRFADFYEA ARKVGGDYFD YIPQPPKSGC DELAVAIADV AGKGVPAALL MARLYAATRY RVIAEANWPD VMRALNGEMS AGGLGHRFVT MLMVIIRPES GTGKVVNAGH LLPLIRRKSG EVELLGLKAS GMPLGLAPLE TIYNELEFHL EPGEMIVIYT DGVTEAMNAE EEMFGRDRIV AMLKEQEWKA EEFVANLVER IEAFADDRSQ RDDLCIVAMQ YAPEMTDTGV
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