| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3177 |
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| Symbol | |
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| ID | 9139891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4110124 |
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| End bp | 4113222 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_003631190 |
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| Protein GI | 296123412 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGAAC AAAAAGGACT TGCGACGTCT GAACTTTCCC CCGTCGGCCT CCGTCCGACA
AATGCCCCCA GCTCCCGGCC TAGTTTTCCG ATGGGAACAT CGCGACCACT TCCGGAAGCT
GCACCCATGC GGATTCGTCC TGAGTTCTGT CCCGAAGGTG TCGATCCTTT TTCGACCAGT
GAATGGGAAC TCCGTTCCGC CTTCATTAAG GACGAAAACG GCAAGGTGCT GTTCGAGCAG
AAGGATTGCG AAATTCCTGC TCACTGGAGC CCACTGGCCA CCAACGTCGT CGTCAGTAAG
TACTTCTATG GCGAGCACGG CACCTCGGAG CGCGAAACCA GCGTCCGCCA GGTGATCAAT
CGCGTGGCCC GCACGATTGC CGACTGGGGT ATCGCCGATG GCTACTTCGC CAGCCGGGAA
GATGGCGAGA ACTTCTACAA CGAACTCGCC TGGCTCTGTC TCCATCAGTA CGGCAGCTTC
AACTCGCCCG TGTGGTTCAA CGTCGGGCTC TACCATCAGT ATGGTGTGGC GGGGTCCAAA
GGGAACTACC GCTTCGATCT CAAAACTCAA GAGGTCGTCC GTGCGGAAAC TTCCTATGAA
TTTCCTCAGG CCAGTGCCTG CTTCATTCAG TCAGTCGATG ACAACATGGA AGACATCATG
CGCCTCGCCA CCAGCGAAGC CATGCTCTTC AAGTTCGGCT CCGGCACCGG GACTGACCTC
TCCTCCATCC GCAGTGCGAA AGAAAAGCTT TCGGGCGGTG GAACTCCTTC CGGCCCACTC
TCGTTCATGA GAGTTTACGA TCAGATTGCG GCTGTTGTGA AATCGGGCGG CAAGACACGC
CGGGCAGCCA AAATGCAGTC GCTCAAGGAC TGGCATCCAG ATATCCTCGA GTTCATCCAG
TGCAAGCTCA AAGAAGAGAA GAAGGCTCGC GTGCTGATCG AATCCGGTGA GTACGATTCG
AACTTCAACG GCGAAGCCTA CGGCTCGATC ATGTATCAGA ACGCCAATCT CTCCGTTCGC
CTGAGCGATG AGTTCATGCG GGCTTACGAA GAAAACAAGA AATGGGTCAC TCACTGGGTC
ACAGATGCCA CCAAGCCCGG CCCTGCCTAC GAAGCTCGCT ACGTCATGCG GCAAATGGCC
GAAGGTGCCT GGCATTGCGG TGACCCTGGC GTTCAGTTCG ATACGATCAT CAATCGCTGG
CACACCTGCC CGAACGATGG TCGCATCAAT GCATCGAACC CCTGCTCGGA ATACATGTTC
CTCGATGATA CCGCTTGTAA CCTTGCCAGC TTGAACTTGC GCAAGTTCCA GCGGGAAGAT
GGTCGCTTCG ATGTCGAACG CTACCGTTCC GCGATCAATA TCTTCCTGAC AGCCCAGGAA
ATTCTGGTCG ATCACGCCAG CTATCCGACT CCACAGATCG CTGCCAACAG CCACAAGTAC
CGTCCGCTTG GTCTGGGCTA TGCCAACCTG GGCAGCCTCC TCATGTCGAT GGGCATTCCT
TACGACAGTG CGGCTGGCCG CGGGATTTGC GGAGCACTGA CCTCTCTGCT CACCGGTCAG
GCTTACCTCA CTTCTTCGCG AATTGCAGCT TTCGCCGGCC CCTTCGAGGG CTATCGCAAC
AATGCCGATC CAATGCTCCG CGTGATGCGT ATGCATCGCG ATGCCGTCGA TCGCATCGAT
TCGTCTTGCC CCGAAGAACT TCGCAAGGCA GCCGAAGAAG TGTGGGATGA TGTGGTCGAT
AGTGGTCGCC GTTTCGGCTT CCGCAACAGC CAGGCCACAG TCCTTGCACC GACGGGAACC
ATTGCCTTCA TGATGGATTG CGATACCACG GGCATTGAGC CCGATATCGC TCTCGTGAAG
TACAAGCAAT TGGCTGGTGG CGGCTTGATG AAGATCGTCA ATCGCACTGT GCCACTCGCT
CTGAAGACCC TTGGCTACGA TTCCCCCGAA GTCGAGCGGA TCGTCAAGGC CATCGAAGAG
CACGACACCA TCGAAGCGGC GACCGATCTT TCACCAGATC ATCTCGCAGT CTTCGACTGT
GCCTTCAAGC CTGCCAGTGG AACACGCAGC ATTCAGTGGC GTGCTCACAT CAAGATGATG
GCGGCTGCTC AGCCGTTCCT CTCAGGTGCG ATTTCCAAGA CGGTCAACAT GCCTGCCGAT
TCGACAGTGG AAGACATCGA AAAGGCTTAT GCCGAAGGCT GGCGACTGGG CCTGAAGGCA
CTGGCTGTCT ATCGCGACGG TTCCAAGCAA AGCCAGCCAC TCAACGTGAA GAAGGGAGGC
GATGGCAATA AGGAAGTGGC TCCAGGCCAG CCTGTCCGCC GCCGGTTGCC CACCACCCGC
CACTCGCTCA CGCATAAGTT CTCGGTGGGC GGGCATGAAG GTTACATCAC TGTCGGTCTG
TTTGAAGATG CCACACCGGG CGAACTCTTC ATCAGTATGG CTAAAGAAGG TTCAACCATC
GGCGGCCTGA TGGACGTCAT CGGGACGGAA ACCTCGATGT GCCTCCAGTA CGGCGTACCG
CTGGAAGTCC TGGTCGAGAA ATTCTCGCAC AGCCGGTTCG AACCTTCGGG CTGGACACAG
AACCCGGATA TCCCGAACGC GAAGAGTGTG GTTGACTACA TCTTCCGCTG GATGGCAATC
CAGTTCATGC CTGGCTTCCG TGAGGCTAAC GTCCCGCGGC GAGCCGAAGC GGCCTCTGCT
GAAGAAGGCG AGAGTGCCGA AAGTCATCGC GTGGCCGGGG CCGCACCTGC GACTCCGGCC
GGCAAAGCAC ACGGCTTGAA CGGCAGCCTG AAGCCGGAGA TCAAGGGGAG TGATAAGCTG
CCAGCTTCAC TGGAAAAGCG AATTCACGCA CCTCTGCCAA CCTCCGGGAC AAACGGCAGT
CATACCACCA ACGGGCATAC GTCTAACGGT CACGCCAACC ATGGCAAAAC GAATGGAAGC
ACGCACGCTG AACTCCATGT TCTGGATCAA TCCCGGAGCC AGCAGTTCAG CCGCTTCCAG
ACCGACGCCC CCGCCTGTAG CAATTGCGGC TCAATCACCG TAAGAAACGG AGCCTGCTAC
CTCTGCCACA ACTGCGGCAC CAGCCTCGGC TGCAGTTAG
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| Protein sequence | MHEQKGLATS ELSPVGLRPT NAPSSRPSFP MGTSRPLPEA APMRIRPEFC PEGVDPFSTS
EWELRSAFIK DENGKVLFEQ KDCEIPAHWS PLATNVVVSK YFYGEHGTSE RETSVRQVIN
RVARTIADWG IADGYFASRE DGENFYNELA WLCLHQYGSF NSPVWFNVGL YHQYGVAGSK
GNYRFDLKTQ EVVRAETSYE FPQASACFIQ SVDDNMEDIM RLATSEAMLF KFGSGTGTDL
SSIRSAKEKL SGGGTPSGPL SFMRVYDQIA AVVKSGGKTR RAAKMQSLKD WHPDILEFIQ
CKLKEEKKAR VLIESGEYDS NFNGEAYGSI MYQNANLSVR LSDEFMRAYE ENKKWVTHWV
TDATKPGPAY EARYVMRQMA EGAWHCGDPG VQFDTIINRW HTCPNDGRIN ASNPCSEYMF
LDDTACNLAS LNLRKFQRED GRFDVERYRS AINIFLTAQE ILVDHASYPT PQIAANSHKY
RPLGLGYANL GSLLMSMGIP YDSAAGRGIC GALTSLLTGQ AYLTSSRIAA FAGPFEGYRN
NADPMLRVMR MHRDAVDRID SSCPEELRKA AEEVWDDVVD SGRRFGFRNS QATVLAPTGT
IAFMMDCDTT GIEPDIALVK YKQLAGGGLM KIVNRTVPLA LKTLGYDSPE VERIVKAIEE
HDTIEAATDL SPDHLAVFDC AFKPASGTRS IQWRAHIKMM AAAQPFLSGA ISKTVNMPAD
STVEDIEKAY AEGWRLGLKA LAVYRDGSKQ SQPLNVKKGG DGNKEVAPGQ PVRRRLPTTR
HSLTHKFSVG GHEGYITVGL FEDATPGELF ISMAKEGSTI GGLMDVIGTE TSMCLQYGVP
LEVLVEKFSH SRFEPSGWTQ NPDIPNAKSV VDYIFRWMAI QFMPGFREAN VPRRAEAASA
EEGESAESHR VAGAAPATPA GKAHGLNGSL KPEIKGSDKL PASLEKRIHA PLPTSGTNGS
HTTNGHTSNG HANHGKTNGS THAELHVLDQ SRSQQFSRFQ TDAPACSNCG SITVRNGACY
LCHNCGTSLG CS
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