Gene Plim_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3176 
Symbol 
ID9139890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4108208 
End bp4109311 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content47% 
IMG OID 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_003631189 
Protein GI296123411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.444736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCG ATGAAGCATG CCAAATTCTA GGAGTAACGA AGGGTTGCAA GCTCGACTCG 
GTTAAAAAGC GTCATCGGTT ACTTGTTCAG GTTTGGCATC CGGATCGTTT CTCAGAAAAC
TCATCGACTC GGAAAGCGGC TGAAGCAGAG TTGAAGGAAG TGAACGCAGC AATTGAGTTA
ATTGAACGTA CGCGTCCTGA GGAGTGGAAC TCAGAGTCGT CCTCCGCCAA CCAATCTGGT
CGCCGTGAAG CTCAAAAAGC TGCAGTGTGG GCAGATGCCC AACGGGAGGT GAAGGCTGCT
GAGGTGGAAG CGGAGAAGCA AAAGGCGGCT GCTTGGGCGG AGAGAGAAAA GCAACGGCAA
AAGGAATGGC TTAATGAGTC TCGAAAAGCT GCGTTATACA CAAAAGTTAG GTGTCGCTGG
CTGACTCCTC TGTTCGGTCG ATTTGCAATT GCCAGTGCAT CAATTCTGGC ATTTACCATA
GTTGTGTGGC TATCTCTGCA TGAGTACCGA AAGTTGCTTC AGCTTGAAAT TGATCGAGAA
ATCAAAGCAG GAATCATCAC TGAATCAAGA TTACAAGCCG CATTGGCCAT CGAGAAGGTG
TCTGAATCCG CACTACGAAA AGAGGAATTG TCCACTGCAC GCATGCGAGA ACTTATGATT
CAAGATGAAA TCGAACTGTC TTCTATTGTA AATGATATTC GCAGATCGCT TCTAGAGGCA
GACCTAGGCG ATGCCAACCA ATTGGAGCGG AACGCCATAA CCATAAAACA GAACTGGCAA
GAACGGTATT CACTGTCTAT TCGTAAGTCA CTCATCTTGC AATTAGCGAA AGCATCGCCA
GCAACGAGGG TGTTGGAGGC GGAAAACAGC AGAAAAAGTG TTGTTGAGCG GCGTAAAGAA
GTTCGGGAAT CACTGAAGCT GGCTGCTGCA AATGAATATC GCATTCTCAA AGACGAGATC
GACAACAGTG ATGCCTCTCT AGAAGAAAAA TCAGTACGAA GCATCTATCT TGATCATATC
TACAGTGCAG CAATCATCGG AATTGACCGG CTTTCGCTTG TGCAGCTTGA AGAAGTGAAG
AGCGAGATGG CCAGCGGGTC ATAG
 
Protein sequence
MNLDEACQIL GVTKGCKLDS VKKRHRLLVQ VWHPDRFSEN SSTRKAAEAE LKEVNAAIEL 
IERTRPEEWN SESSSANQSG RREAQKAAVW ADAQREVKAA EVEAEKQKAA AWAEREKQRQ
KEWLNESRKA ALYTKVRCRW LTPLFGRFAI ASASILAFTI VVWLSLHEYR KLLQLEIDRE
IKAGIITESR LQAALAIEKV SESALRKEEL STARMRELMI QDEIELSSIV NDIRRSLLEA
DLGDANQLER NAITIKQNWQ ERYSLSIRKS LILQLAKASP ATRVLEAENS RKSVVERRKE
VRESLKLAAA NEYRILKDEI DNSDASLEEK SVRSIYLDHI YSAAIIGIDR LSLVQLEEVK
SEMASGS