| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3167 |
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| Symbol | |
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| ID | 9139881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4096903 |
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| End bp | 4100043 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003631181 |
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| Protein GI | 296123403 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.213021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTTCC ATGTGAAATC AGTGGTTGAG ACAGGTGGGC AGAGTCAGGT CTATTCGGAC
AATCAAGTTC CGGCCTGCCT CCGCTTTGGG TCAAATGTCA TATCAACCTT TCTCGATTTG
TACCGCAAAA GGTGTTTCAT GAGTTTCTGG ATCAGACCTC GCGGTTCGCA CCATCCAGGC
CCTGTCCGCC ACAAGCCCGG CATGGGCATT CACTGGATGA TCCTGTGCTC TTTGACACTC
TCGATCATTT CGGGATGTGG GCAAAGCCCA TCCAGCAGCC AGACTCCCGA GCAGGTGACA
TCGAATGCAA GCTCTGCTTC CACTGAACCC ACTGCGAATG CCACCACAGC CGCACAGCCT
CAGGCAGTTG CCAACTGGCT CGAAAATCCT CAGGCCATCG ACTTGTCCGG GCGGTATGGG
CGTCGATTGC AGATCGTCTG GAAAGACGCC ACTCGCGATC CCATGGAGGG CGATGACGAC
GACGACTCGA TGGCAGATCG CGATGTGACG TCCCCAATTG ATCCAGCAGA CGCGAACGAT
CCCCTGATGG CCGAGAATTT GCCAGCGGGC TCGTCACAGG TCACCACAGG TAAAGACAAC
GCTTTTGGTG CTGCCAACGA AGAGAAACCT GACGATGCCA GCGTGAGCCA ATCGTCTCAG
GCCGATTGGT ATGTGCTGAT TGACGGTGAG CCCGTGCGAG ACGAGACCGG GATCCTGTTG
TCGATCCCTT GTGAAGTCCG TGTCCCTCCT GGTCCTCATG AAGTGACTTT GGCTCAGCCG
GGAATGGTTG ATCTATCGAA AAAAGTGGAG ATCCGGCAGG ATCGCAAAGT CAGTTTCGAA
CGACCCGAGA AGCCGGTGCG TGGAGCCTCT TCGCTTTCGG GGCCACTCTT TGACCTGGCA
AGAGGCGAGT TCCTTCCACT CGATGAACTC AACACTGCCG GGAAAGAGTA CGACCCCTGG
CTTTCTGCTG ATGGACTCAC GCTGGTCTTT GCCGGTGATC GAGCGGAAGG CCGAGGCGTT
TACCTGGCGA CACGTCCCAC AAGATACCAT GCCTTCTCGC CTGCCGAGTT AATTGAAATT
ACACGGTCGG GCGAATTCGT GGCCACGCCC GTCCTCTCAC CGGATGGGTT GAGTTTGATC
TATGTGCACC CCGCCCGCAC GCGGATCTGG CTGCTGGAAC GCAATTCCGT CGATGATCCC
TTTGTCAAAC GGACAGCTCT TAGGAGCATC GATCAACCGG GGTTCGAATG GATCGGGGCT
CAACTGATGT TCCCAGAGGC CATTTCACAG ACACCGCAAT TCAAAGCTTC GGCAAACTTC
CAGTTAGCTT GGATCGAACG TAACGCCGCA GGTCAACAGC AGGTTTTTGT CGCCGAAGGG
CCGAGTCTGG GGAGTTTGTC CAAAGCCCAG GGCAAAGCGA TCATTTTACC CGGAGACCGG
CCCTGGTTTA CCGCTTCGAC GGATCGTCAA TTCAGTCTCG ATGGTCATGT TCTGCAGAGG
TGGATTCGTG AACAATCTCT TGGGCCGGTC GCCTCGGCAC TCTATGGAAA TCCATCGCCC
ATTGGAGAAT TTCCCGCTGG ATTTCCTCCT CCACTCGCCA ACGAACGATC GCTGTTTATT
ACCGATGATG AGCAGTGGGC TGTCGCTGCC GTCACATCCG CAGCCAGCGA AGCCACACTA
CAACAACAGC CGGGCGATCT CATGCTGCTT CGTCTCTCTG ATGGCCCGCA ATGGGGTTGG
AAATTCCAGG GGCGCAGTCT GAAGCCAATC CCCTCCACCG AGACCACACC GCCGACATTA
GTCGCTGATC AGTCAGCCTC GAAAGTCATG AATGCAGAAG ACCGTTCATC ACCAGCCACG
ACGAATCCAT CAACTCCCGT TCGTGAGGAG ATGGATCCCT CCGTGAAGAC GAACGCCGAT
CCCGCAGCGA CCGTCGCGAA CCAGCCTGTG CAACCAGTGG AAGTTCAAAC GGCCTATTCG
ACCTATGAGA AATCTCTGGC TGAGTTTCGC AAGGCTCTGG AAGCTCGAAA TTATGAACAG
GCGGCACAAA TCCTCCAGCA GCGGCGAGAA ACTTCGTTTG CGACCGCATT GAATCCACTG
ACAGAACTCG ACCTGGCCTG GCTGAAAACA CTCAATGAGT TTCAGGTCAT GGTGAACGAT
GGTGTTCGCC AGCTGGAGCC CGGCACCACA GTACGCGTCG GTTCTGCCAA GCTGGAGTTG
ATTGGTCTCA AAGAGGGTGT TCTGAGTTTG AAGTCGCGAC TGAAGACCAT TGAAAAACCT
TTGTGGGAAA TGTCGACGGG CGATCTGCTG GCACTGGCCG AATCTCTGCC GGGTGGGACG
AATCAGGCAT CCGCGCTGAA GACGCTCGCT TTCGTAAAGG CAGATCCTGT TCTTCCAGCA
CGAGTCATCG AATTGTGGCT GGGCCGTGCG GGCCCCGGCG GACAGGATTT TCTCGAAGCG
TTCAGCACTC GCGAACTTGA AGAAGGCCGC CTGGCTCTGG CCGAAAATCG GTTAAGCAGT
GCGATCGAGC ATTTTGGCAA GACGATTGCC GCCGGGCCGG AAAGACCCGC CGCACAGGCA
GCCGAAAAGG AAAAAGCCCA GCTCTATGAT CGCACTCGCT GGAAGATTGT CGGCAAGCGT
GACTGGGCTC GCGGCCCTGA CGGTGAATGG AGTGCTGATG CCCGGCGGAT CGACGGGGCT
TATCTCGTTT CCGAAAGTGA TTACGAAAAC TTCGTATGCG AGTTTGAATG GAAAGCCGAT
CAACCCGGTG CACAGGGTGG GCTTTACTTT CATTATGCCG GTGAAGGAAA CCCCTTTGAA
TTTGGCTATA AAATCCATCT TGCTGGCGAC ATGGATCAGC AGGGAATGGA TCAATATTCA
ACGGGTGCCC TCTTTGGATC GGATGCACCC AAAAAGAAGG TCGCCAAAAA GAATGCTTGG
AACCGCTTCC GTTTGACAGT CGTCGGCCCT AAGACGACTG TCCAGATCAA CGATGAAGTC
GTGCTCGAAA CCGATGTGCC TGTTTCCAAA AGCGAACCTC GTGGTTATCT GGCAATCGAC
GGAGTGGGTG GCGCCTTCCG CTATCGCAAG ATTCTGGTTT ATGAACCGAG CAACTCTCCA
GCTGCCAAGC CTCAAAACTA G
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| Protein sequence | MIFHVKSVVE TGGQSQVYSD NQVPACLRFG SNVISTFLDL YRKRCFMSFW IRPRGSHHPG
PVRHKPGMGI HWMILCSLTL SIISGCGQSP SSSQTPEQVT SNASSASTEP TANATTAAQP
QAVANWLENP QAIDLSGRYG RRLQIVWKDA TRDPMEGDDD DDSMADRDVT SPIDPADAND
PLMAENLPAG SSQVTTGKDN AFGAANEEKP DDASVSQSSQ ADWYVLIDGE PVRDETGILL
SIPCEVRVPP GPHEVTLAQP GMVDLSKKVE IRQDRKVSFE RPEKPVRGAS SLSGPLFDLA
RGEFLPLDEL NTAGKEYDPW LSADGLTLVF AGDRAEGRGV YLATRPTRYH AFSPAELIEI
TRSGEFVATP VLSPDGLSLI YVHPARTRIW LLERNSVDDP FVKRTALRSI DQPGFEWIGA
QLMFPEAISQ TPQFKASANF QLAWIERNAA GQQQVFVAEG PSLGSLSKAQ GKAIILPGDR
PWFTASTDRQ FSLDGHVLQR WIREQSLGPV ASALYGNPSP IGEFPAGFPP PLANERSLFI
TDDEQWAVAA VTSAASEATL QQQPGDLMLL RLSDGPQWGW KFQGRSLKPI PSTETTPPTL
VADQSASKVM NAEDRSSPAT TNPSTPVREE MDPSVKTNAD PAATVANQPV QPVEVQTAYS
TYEKSLAEFR KALEARNYEQ AAQILQQRRE TSFATALNPL TELDLAWLKT LNEFQVMVND
GVRQLEPGTT VRVGSAKLEL IGLKEGVLSL KSRLKTIEKP LWEMSTGDLL ALAESLPGGT
NQASALKTLA FVKADPVLPA RVIELWLGRA GPGGQDFLEA FSTRELEEGR LALAENRLSS
AIEHFGKTIA AGPERPAAQA AEKEKAQLYD RTRWKIVGKR DWARGPDGEW SADARRIDGA
YLVSESDYEN FVCEFEWKAD QPGAQGGLYF HYAGEGNPFE FGYKIHLAGD MDQQGMDQYS
TGALFGSDAP KKKVAKKNAW NRFRLTVVGP KTTVQINDEV VLETDVPVSK SEPRGYLAID
GVGGAFRYRK ILVYEPSNSP AAKPQN
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