Gene Plim_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3166 
Symbol 
ID9139880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp4095845 
End bp4096567 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content57% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003631180 
Protein GI296123402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.240946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGCTT CCCGGACAGA TTGTGTCATC GTTGATCATG TCGCCAAATC GTTTCGTCGC 
GGAAGTGAAG AAGTTCATGT GCTGGATGAA CTCTCTTTGC GCGTCCCGGA AGGCGAGTTT 
CTGGCCTTAA TGGGCCCCTC AGGCTCAGGC AAAACCACAC TTCTCAACTT GATTGCCGGT 
CTGGATCGAC CGACATCGGG CGAAGTGACA GTGCGTGGTG AGCCGATCTC CCGCCTCTCC 
GAAGGCAAAC TCGCCCTGTG GCGCACACGG AACATCGGCT TCGTGTTCCA GTTCTATCAC 
CTGCTCCCTG TCCTCTCCGC ATATCGCAAT GTGGAGTTGC CACTTTTACT GCTCCCGATG 
ACAGCCGCCC AGCGCCGGCA GCAGGTCGAA ATGGCGCTGA ACATTGTGAA TCTCTCGGAT 
CGTATGCATC ATCGCCCCGG TCAACTTTCC GGCGGTCAAC AGCAGCGCGT GGGAATTGCC 
CGGGCGCTCG TTACCGATCC CGCCCTGATT GTGGCGGACG AACCGACGGG CGATCTCGAC 
AGTAAAGCGG CCGACGAAAT TCTTGCCTTA CTCGTCGCTT TAAAAAGCTC GCTGAACAAA 
ACCATTGTCA TGGTGACCCA CGACCCGAAA GCCGCTGCCC GGGCCGATCG CACTTTACAT 
CTCGAGAAGG GGAAACTCGT CGATGAAGTT TATGGAGCCC ACACCTTTTC CGGTGTTCAT 
TAA
 
Protein sequence
MVASRTDCVI VDHVAKSFRR GSEEVHVLDE LSLRVPEGEF LALMGPSGSG KTTLLNLIAG 
LDRPTSGEVT VRGEPISRLS EGKLALWRTR NIGFVFQFYH LLPVLSAYRN VELPLLLLPM 
TAAQRRQQVE MALNIVNLSD RMHHRPGQLS GGQQQRVGIA RALVTDPALI VADEPTGDLD 
SKAADEILAL LVALKSSLNK TIVMVTHDPK AAARADRTLH LEKGKLVDEV YGAHTFSGVH