| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3165 |
|---|
| Symbol | |
|---|
| ID | 9139879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4094383 |
|---|
| End bp | 4095651 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_003631179 |
|---|
| Protein GI | 296123401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.296163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTAA CATTACGGCT GGCATGGCTG GTGCTGGACA ATACGTTCCG GAATCCCTTG
CGCACTTTAT TAACCGCACT GGGGACCGTC GCCCTCGTAC TGGTCGTCAC GCTCGTCTAC
ACCGTCCTCG ATAACCTTGA TCGAATCACG ACGGAAAAAA GTGCGAATCT CAAGCTGATT
GCGACCGAGA AGTGGCAGAT TCCCAGCCAG TTGCCATACC GATATGTCGC TGGTCTGGCC
CAGGGTGCTG CCAAAAATGA GACAGATACT CGACCGACCG ATTATATGTC CTGGGCCTTT
TTTCTCGGTT CACTCGAAGC GGATCAATCG AGTCGCGATT TCAACTCTTT CATCTTTGCC
TTCGTGATGG AACCTGAAAA AGTTCTCACC ATGATGGATG AACTCGATGA GCTTTCGCCC
GATTCCAGTG ACTATAAAAA TCTCGCGGCG GCCGTCGAGA AACTCAAGCA GAATAAGCAG
GGGATCATTC TCGGCCAGAG CCGGATGAAG AAGCTGAATA AAAAGGTCGG CGACCGCTTT
AAACTCTATA GCCGTAATTA TAAAGATATT TCTCTCGAAT TTGAAATCGT AGGAACTTTC
CCTCAAGGCC GATATGATGA ATCGACCACT TTTCGTCGTG ACTACCTGAA TTCGGCACTC
GATCAGTATC AGCGTGATAA AGGTAAGCCT CATCCTCTGG CAGACAAATC GTTGAACCTT
GTCTGGCTGC GTGTCCCGAC TCGCGATGCC TTCAATGAGG TCGCTAATCA AATTGCCGAG
GCTCCTGAAT TTTCTGCACC AGCAGTCAAA GTCGAGACCG CCTCTTCCGG CATCGGCAAC
TTTCTCGAAG GTTATCGCGA TCTGTTATGG GGGGCCCGCT ATCTCCTGGC ACCGGCATGT
ATGGCCACTT TGGCGTTAGT CATCGCGAAC TCGATCAGCA TCAGCGTGCG CGAGCGGCAA
CAGGAGTTCG CTGTCATGAA AGTGCTCGGT TTTCAACCTT ATCAGATTCT CCTGCTGGTG
CTGGGTGAGG CTTTATTAGT AGGTGTCGTG GCCGGCTTCT TCAGTGCCAC CGCAACCTAC
GCCTTTGTGA ATTACGGGCT GGGTGGTTTG CCCTTCAAAA TTGGATTTCT ACCCACTTTT
GATGTCCCTG TCAGTGCCAT ATTTGTTGGT ACATTAATGG GTGCTGGCAC CGCCCTCCTG
GGGAGTCTGA TTCCTGCCTG GTCAGCCTGC AGTGTCAAAG TTTCGGAAAT CTTCAGTCGC
GTCACTTAA
|
|---|
| Protein sequence | MGLTLRLAWL VLDNTFRNPL RTLLTALGTV ALVLVVTLVY TVLDNLDRIT TEKSANLKLI
ATEKWQIPSQ LPYRYVAGLA QGAAKNETDT RPTDYMSWAF FLGSLEADQS SRDFNSFIFA
FVMEPEKVLT MMDELDELSP DSSDYKNLAA AVEKLKQNKQ GIILGQSRMK KLNKKVGDRF
KLYSRNYKDI SLEFEIVGTF PQGRYDESTT FRRDYLNSAL DQYQRDKGKP HPLADKSLNL
VWLRVPTRDA FNEVANQIAE APEFSAPAVK VETASSGIGN FLEGYRDLLW GARYLLAPAC
MATLALVIAN SISISVRERQ QEFAVMKVLG FQPYQILLLV LGEALLVGVV AGFFSATATY
AFVNYGLGGL PFKIGFLPTF DVPVSAIFVG TLMGAGTALL GSLIPAWSAC SVKVSEIFSR
VT
|
|---|
| |