Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3155 |
Symbol | |
ID | 9139869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4084411 |
End bp | 4085205 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | 2-dehydro-3-deoxyglucarate aldolase |
Protein accession | YP_003631169 |
Protein GI | 296123391 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAGA ACCCTGTCAA ACGTGCTTTG GCCAATGGCG AGCCACAAAT TGGCACATGG CTTTCTTTAG GGAACGTCTT CGCCGCTCGT TTAATGGCCC GCAGTGGCTT TCACTGGTTG ACGGTCGATC TGGAACATTC GCCCATCGGG TGGGATAGTG CCGGGCTTTT GTTTGGGGCG ATTGCCGATG CCGGTGGCGT TTGCCTGGCC CGAGTTCCCC GTGGCGATCA CGATTACATC AAACGGGTGC TCGATGCGGG GGCACATGGC ATTGTCGTCC CCATGATCAA CACTGTGGAA GAAGCCAAAA TTGCGATTGC TGCCGCCAAG TATCCGCCTG CCGGAAATCG TTCGGTGGGT GGTTCGATGC ATGCGCTGAA CTTCGGCACC AGTGCTGGCG ATTACTACCA GCATGCCAAT GATGAGATTC TCGTCGTCCT GCAGACAGAA TCCCCCGAAG GAGTGGCTAA TGCTGACGCG ATCTATTCGC TGCCGGGAGT TGATGCGATT TTCGTCGGCC CCAATGATCT CGCAGCGCAG ATGCGTGCTC CCGATGGTAC CGAAGCGACT CAAGAAGAGT TTGAGGTCAT GCTCGGCCGG ATACTGGCGG CTGGTCAAAA ACATGGCGTG CCTGTGGGCA TTCACACTCA ATCAGTCGAG CAGGCTCAGA AGCGGATTGA TGCCGGCTGG CAATTCATTG CTGTGGGCAG CGAGCTGAAA TTCATGGTAA CTGGCGCGCA GGAAGTCGTC GCCAACCTCG GCCTCCAAGC CGCCGGCGAC CTCGCCCGGT ATTAA
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Protein sequence | MWKNPVKRAL ANGEPQIGTW LSLGNVFAAR LMARSGFHWL TVDLEHSPIG WDSAGLLFGA IADAGGVCLA RVPRGDHDYI KRVLDAGAHG IVVPMINTVE EAKIAIAAAK YPPAGNRSVG GSMHALNFGT SAGDYYQHAN DEILVVLQTE SPEGVANADA IYSLPGVDAI FVGPNDLAAQ MRAPDGTEAT QEEFEVMLGR ILAAGQKHGV PVGIHTQSVE QAQKRIDAGW QFIAVGSELK FMVTGAQEVV ANLGLQAAGD LARY
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