Gene Plim_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3149 
Symbol 
ID9139863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4073628 
End bp4074701 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content54% 
IMG OID 
ProductCRISPR-associated protein, GSU0053 family 
Protein accessionYP_003631163 
Protein GI296123385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTGT CTAAGAAAAT TGATGAGTTT CTGTCATTGA ATGGCCCTGC CGCATTGGTG 
ATTCGCGAGC ACCTGACGCC CGTCGAGGGC GAAGATGGTG TGCTATTTCC TCCAACTTAT
GCCGCCCAAA AGTCTGGCGA ACCCGGCGGA TACAACATCG ACACAGATGC ACAAGGGCAG
TCGATTTGTC TCATCGACAG TGTCGGTGCT CAGGCTAATC GCATCGAACC GATGTTCGAA
GAAGAACCTT ACTCGTCCCT CGTTCCACAA ATTGTCGTCA AGGCGGGTGA AAAGGAAGTC
AGTATTTTTG AAGCTGGTCA TCGGGCGGGT GACGCACTCG TTCGCTGTTC GGAACTTCAG
CAGACTTTAC AGGATGCCTT TAAGTCTGTT CTCAAAGGTG ATGCCGAGCC ACTCGCCAAG
ATCGCACCCA CTTCCTTAGT CTTCGGCGTC TGGGATTCAC GCGACACCCA GGCCAAACTT
CCACGTATCA TTGGCTCGAC CATCCGCGCT TATGATGTGA GCAGACTCAA GCGCTCCGCC
CAGTTCAATC CTGCAACAGA GTATGTCAAC GAAGGCTTAC TCCCTGAGCC AGCGGATAAA
ACGGCCAAAG ATGCTTTTGC TGAACGAGGA TTTATCCATG TTCCAGCCAC AGGCTCCCAT
GGCGGCATCA TTGCCCACGG CGGTATTCGT CGCGATGCAA CATTAGCACT CACAGCTATT
CGCCGCCTCT TCGCAGGCAA GGATGACGCA AAGACGCTCA AACTCCGCCG CTACATTCTT
GGCCTCTCCC TCGTCGCCTT TACTAAGAAT CCTGCGGGTG ACTTGCGACA GGGCTGCAAT
CTGGTGCTGG ATCCTTCCAA ACCACGAGAA TTTGTTGAAG TCCTGCCGAC GGGAGAACGA
AAACCCGTCA CATTCACCCA TGAAGACGCA CTGGCGTTCG CCCAGCAGGC CGCCCACGAT
TTCGGCGTCG GCGAAAGCCG GGTTGTCCCC TTCGACAAGC AGCGGGCACT CAAGGATGTC
AGCCCCAAGG ACAAGGAAGA GAAAAAGTCT AAGCCGAAAG CCGCCAAGTC TTGA
 
Protein sequence
MSLSKKIDEF LSLNGPAALV IREHLTPVEG EDGVLFPPTY AAQKSGEPGG YNIDTDAQGQ 
SICLIDSVGA QANRIEPMFE EEPYSSLVPQ IVVKAGEKEV SIFEAGHRAG DALVRCSELQ
QTLQDAFKSV LKGDAEPLAK IAPTSLVFGV WDSRDTQAKL PRIIGSTIRA YDVSRLKRSA
QFNPATEYVN EGLLPEPADK TAKDAFAERG FIHVPATGSH GGIIAHGGIR RDATLALTAI
RRLFAGKDDA KTLKLRRYIL GLSLVAFTKN PAGDLRQGCN LVLDPSKPRE FVEVLPTGER
KPVTFTHEDA LAFAQQAAHD FGVGESRVVP FDKQRALKDV SPKDKEEKKS KPKAAKS