Gene Plim_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3148 
Symbol 
ID9139862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4072742 
End bp4073641 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631162 
Protein GI296123384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACG ATCAACCCGG AATTCGCGTT GATGTGGACG TAACCAACCC CGGCCAATTC 
TTCGCCTGCT GCGGCTTACT GGAACTCGCC GACCGCCTCT GGCCCGGTGC CGAAGGCTGG
TTTGAACCGG GAAGTCGCAC ATTTAACATT AACTGCGTCG GGACGCTCCA GACTCTCGTG
ATATCACTGC ACGAAGCAAA GTTGGTAAGC ACCATGACGG CACCGCAGCG TCGTCGACTC
GAAGAGCTAT CTTCCCTCAA AGCAAAAGAG TTGAAGGAAC AGCCATCACT GGAAAACGAG
AAAAAGGAAC TTGAAAAACT GCGTAGAGAA TCGCCTCTAG TGTTGCTGGC TCCATTTTCA
ATCCGACTTG ACTGGTTTGA AGATGAATTC TCTGGGGGTG GTCGATTCAA GACATGGGCT
GGCCAGCAAT CAGTGGAATC AATTTCAACA TCCATGAAAC ACGCACTGAG CACTTTTACT
TGGTGGCCAC ACCCTCCGAA GACACTGCTG GACGAAATCT CTCACGAAAA TGGATTGGGC
TTCAACTTTG ATTCCCATGT AAGTAGCCAA GGATCTGCTC TTGATGTTGG TTTCAGCCTT
GATTCACTGT CTACAAACTC GACGACCAGA ATTACCGTAG GTGCCAGACC ATACCAGGAA
TTTCTTACAT TCGTCGGCCT TCAGCGGTTT CGACCATTAG AAGTCTCCAA CGAGAACCGG
TTCTTGTATC AAGCTTGGAC AACTCCACTC AACCCACTTC TGGCGGCTGG AGTTACCTCT
TGCACCATTG ACGCGATTGC GCACCTGACA TTCGAGTTTC GACTCTTGTA TCGAACTAAG
TATCTGAAGA GTTTTCTAAA CGCCACACCC TATTCTGGAG CGACAAATGT CCTTGTCTAA
 
Protein sequence
MSNDQPGIRV DVDVTNPGQF FACCGLLELA DRLWPGAEGW FEPGSRTFNI NCVGTLQTLV 
ISLHEAKLVS TMTAPQRRRL EELSSLKAKE LKEQPSLENE KKELEKLRRE SPLVLLAPFS
IRLDWFEDEF SGGGRFKTWA GQQSVESIST SMKHALSTFT WWPHPPKTLL DEISHENGLG
FNFDSHVSSQ GSALDVGFSL DSLSTNSTTR ITVGARPYQE FLTFVGLQRF RPLEVSNENR
FLYQAWTTPL NPLLAAGVTS CTIDAIAHLT FEFRLLYRTK YLKSFLNATP YSGATNVLV