Gene Plim_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3139 
Symbol 
ID9139853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4058906 
End bp4059460 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631153 
Protein GI296123375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00837741 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGGT CATTTTTTCG AGATGAAAGC GGTTTTATTG TCAGTGCCGA ACTGGTACTG 
ATTGGCACGT TGGTTGTTCT GGGAATGATC ACAGGTCTTG TCTGTCTTCG TTCAGCTGTG 
GTCGATGAAC TCGCTTCGCT GGGAGCCGCA TTCCGTGGCA TGAACCAGAC CTATTACACG 
CCGGCATTTT TTGGTTGCCG CAAGTGGTGG GGACGCACCA GTTTCACAGC GGGTTCATTC 
TATAGCGATG GTCGCTATTT CGCATCGTAT CCTCTAGCGA CCGAGATCCA GGGTGGCTGG 
GGAACGAGCG ATTTTGTTCC AGCCGCACCA CCTGTGATCA ACACTGCTCC TGGCGATAGT 
AAGACAGTAA CACCCTCGCC CTTGACACCT CAGCCCGAAG ATTGCCCGCC ACCCGCTGTG 
ACAACTCCTT GCGACAATTG TCCTCCCGAA GGAAACGTCC ACGGCCCGGT AGCTCCGCAA 
TTTCCTCAGT ATGGGCCCGA TGGCAAGCCG TTCATCCCCT TTGGCCCATC ACCACAGGCA 
TTACCACAGT TTTAA
 
Protein sequence
MLRSFFRDES GFIVSAELVL IGTLVVLGMI TGLVCLRSAV VDELASLGAA FRGMNQTYYT 
PAFFGCRKWW GRTSFTAGSF YSDGRYFASY PLATEIQGGW GTSDFVPAAP PVINTAPGDS 
KTVTPSPLTP QPEDCPPPAV TTPCDNCPPE GNVHGPVAPQ FPQYGPDGKP FIPFGPSPQA 
LPQF