| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3135 |
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| Symbol | |
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| ID | 9139849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4055204 |
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| End bp | 4056958 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_003631149 |
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| Protein GI | 296123371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.519108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCT TTTCTCAACT TTTCAAAGAA CTGGATGCGA CGACACGCAC CAGCGAGAAG
TTAGCCGCAC TGGAGAGATA TTTTGCCCAG GCAGAGCCAG TCGATGCCGC TTGGGCCGTT
TGGTTTTTGA GTGGCCATCG CCCGGCGCAG CCTGTTCCGG TGAAGCGTCT GAGGCTCTGG
GCAGCCGAAC TGGCTGAACT TCCTGAGTGG TTGTTCGCTG AATGCTATGA AGCGGTGGGT
GATCTGGCCG AGACGATTGC GCTGCTGCTT CCGCCACCTC AGGAGAGTGA GGATCGACCC
TTTTCATGGT GGATTACTCA AGTACTTCTC AAACTGCGCA ATGCCGGCGA ATCTGAACAG
AAATTGATGC TCAAGCACGC CTGGAGATCG CTGGGCACGA CTGAACGGTT TGTCTGGAAC
AAGCTGATAA CGGGCGGTTT TCGTGTCGGG GTTTCGCAGC AACTGATTGT GCGGGCGATC
TCTCAAGTGA CAGGGATAGC AGTACCCATT TTATCTCATC GCCTGATGGG AAACTGGCAG
CCGACAGCAG AAAACTATCG CGCCTTGATC GAGCCGGAAG GGCAGGAGCT GAATATCAGT
CAGCCCTATC CGTTCTGTCT GGCTTACCCT TTGGAGGACG AAATTCAAAC GCTGGGTGCG
ACCTCCGATT GGCAGGTTGA GTGGAAGTGG GATGGGATTC GAGCGCAGGT GATCCATCGA
CAGGTCATGG GTTTCGACGG TGGTGAGGTC TTCATCTGGT CGCGCGGTGA GGAGTTGATT
ACCGAGGCTT TCCCGGAGTT GATTCCTGAG ATTGAGCAGT TGCCTTTGGG AACGGTGCTG
GATGGAGAGA TTCTGATCAT CAAGGAAGGA CAGCTTCAAC CATTCTCACA ACTGCAGAGG
CGGATTGGCA GGAAGACCGT CGGGAAGAAA CTGCAGCAGG ATGTTCCTGC GGGAATGATG
ATTTTCGACT TGTTAGAGCA CAAAGGGCAA GACCTGAGAA ATGAGCCTTT AGTGCGCCGC
AGGGAGTTAC TGGAGAAACT GTTTGAGGGG TTGCCGCTTA CTCGATTGCA GTTGGCACCA
CTCATTCACG AATCGAGCTG GGAAGAGATG GCGAATGTGC GGGCTACGAG CCGGGAGCGA
GGTGTCGAAG GCTTAATGCT CAAGCGAAAG AGTTCGACTT ATCAGGCTGG TCGAGTGCGT
GGTGACTGGT GGAAGTGGAA GATCGAACCG ATGACGATTG ATGCCGTGCT CGTCTATGCC
CAGCGGGGTC ATGGGCGAAG GGCCAGTCTT TACAGCGATT ATACATTTGC TGTCTGGGAA
GGGAATGTGC TGGTACCGTT CGCCAAGGCG TATTCGGGTT TGACCGATGA TGAAATGCGG
GAAGTGGACA AGTTTGTTCG CGAACATGCC ATTGAGAAAT TTGGCCCGGT TTGCAGTGTG
AAGGCTGAGC TGGTGTTTGA AATTGGCTTT GAAAGTCTTC AGGAGTCGCC CCGGCATAAA
TCCGGGATTG CCGTGCGATT TCCTCGCATG CTCCGCTGGC GAAAAGATAA GACACCACTG
CAGGCAGATC GGATGGAAGA GATCCGGCAG ATGTTGAGAT CGATGAATCT CCGTGCCGAT
CCTCAGAGAG AAGATTCATC AACTCTGGTG GCCCGGCGAA AACTCAAAGC CCCCCAATCG
ATCAGGGCCG AGTCTCAACT GCTGTTGTTT GGTGATGATT TCGACTTGAT GGATGATGAT
CCGCCGGAAG CATGA
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| Protein sequence | MRRFSQLFKE LDATTRTSEK LAALERYFAQ AEPVDAAWAV WFLSGHRPAQ PVPVKRLRLW
AAELAELPEW LFAECYEAVG DLAETIALLL PPPQESEDRP FSWWITQVLL KLRNAGESEQ
KLMLKHAWRS LGTTERFVWN KLITGGFRVG VSQQLIVRAI SQVTGIAVPI LSHRLMGNWQ
PTAENYRALI EPEGQELNIS QPYPFCLAYP LEDEIQTLGA TSDWQVEWKW DGIRAQVIHR
QVMGFDGGEV FIWSRGEELI TEAFPELIPE IEQLPLGTVL DGEILIIKEG QLQPFSQLQR
RIGRKTVGKK LQQDVPAGMM IFDLLEHKGQ DLRNEPLVRR RELLEKLFEG LPLTRLQLAP
LIHESSWEEM ANVRATSRER GVEGLMLKRK SSTYQAGRVR GDWWKWKIEP MTIDAVLVYA
QRGHGRRASL YSDYTFAVWE GNVLVPFAKA YSGLTDDEMR EVDKFVREHA IEKFGPVCSV
KAELVFEIGF ESLQESPRHK SGIAVRFPRM LRWRKDKTPL QADRMEEIRQ MLRSMNLRAD
PQREDSSTLV ARRKLKAPQS IRAESQLLLF GDDFDLMDDD PPEA
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