Gene Plim_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3132 
Symbol 
ID9139846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4052870 
End bp4053391 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003631146 
Protein GI296123368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATTC AGCGCCATGC TCACGGCTCG GAGATGAATC TAGAGCCCAA TCTGACACCA 
CTGCTTGATC TCGTGTTTCA ACTCATCACG TTCTTCATGC TCGTGATCAA TTTCAAAGGA
GCATCTCTCG ATTTAAGCCT GAAACTCCCT GTTCTGGGCT CAGCCAGGCC CATTGAATGG
AAAAAAGGAA CAGAGCCCAT CGTGATCAAT CTTCGCAGCG ATGGGACTGC CCAGGTTTAC
GGCGAACCCA TCGATCCTGC CGAGTTTTTC GCAGCCATGG CTCGACAAGT CTCCAATGCT
AAAAATCCCG ATGCAGAGGC CGAAAGCCGA CCTGTCATTC TCCGTGCGGA TGAGCGGGTT
CCTTTCTCGC GGATCAACGA ACTGATGACT CTCAGCCGTG AACATGGATT TGAGAATTTC
GCACTCAGTG CCATGGTACC TTCCGCTCAG ACTGGCCCTG GAAATCGTTC CAAGTCTGTT
CCAAAGGTAC CCGCAACCAG AGAGCCAGGA GGTTCACCAT GA
 
Protein sequence
MPIQRHAHGS EMNLEPNLTP LLDLVFQLIT FFMLVINFKG ASLDLSLKLP VLGSARPIEW 
KKGTEPIVIN LRSDGTAQVY GEPIDPAEFF AAMARQVSNA KNPDAEAESR PVILRADERV
PFSRINELMT LSREHGFENF ALSAMVPSAQ TGPGNRSKSV PKVPATREPG GSP