| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3120 |
|---|
| Symbol | |
|---|
| ID | 9139834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4039641 |
|---|
| End bp | 4040930 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
|---|
| Protein accession | YP_003631134 |
|---|
| Protein GI | 296123356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.965868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGTC GAGTAGTCAT TACAGGTATT GGTGCCATTA CTCCCATTGG TAACTCGATT
GAGGAGATGT GGAAGGCCCA GCAGGAAGCC AAGTGCGGCA TCAGCACGAT TACGCATTTC
GATGCCAGTC GATTCCCGAC GACTTTTGCT GGTGAAGTGA AGGGCTTCAA GCTCGAAAAT
TATGTTGCTG ACACGACGCC GTTCCAGTTC AGCGGCAAGA ACATTCATTA CGCACTGGGT
GCAGCCCGAC AGGCTTACGA TGATTCGGGT TTATCGGACA GTGATCTCGA TCCGGGTCGT
CTGGGAGTTT ACCTGGGTGC CGGCGAAGGG CAGCAGGATT TTCTGATGAT CATGAGCATT
ATTGCTCAGG CCCAGAACAC CGCGACGGGA GAAGTCGATC TGGAAGTCTT TACGCGGGAA
GGATTGGCCC GCATGCATCC CCAGAAAGAA ATGGAGCAGG AGCCGAACAT GACAGCCGGA
CATCTGGCTG CGGTGTTTAA TGCTCAGGGG CCGAATCTGA ATTGCCTGAC GGCATGTGCT
GCTTCGAGCC AGGCGATTGG TGAAGCGACA GAAATTATCC GCCGGGGTGA TGCCGATGCG
ATGATTTCGG GTGGTGCTCA CAGCATGATC CATCCCTTTG GAGTGACCGG CTTTAACCTG
CTGACAGCTC TTTCGACTCG CAACAGCAGC CCACAGACAG CTTCGCGGCC GTTTGATAAG
GATCGTGATG GATTCGTGCT GGGCGAAGGT GCCGGCATTC TGATTCTGGA AGAACTGGAA
CATGCCAAGA AGCGTGGGGC CCACATCTAC GGTGAAGTCG TGGGTTATGG TTCAACGGCC
GATGCCTACC GGATTACAGA TATTCATCCA GAAGGGCGGG GAGCCATTGC CTGCATGAAG
ATGGCATTGC AGGATGCCGG GCTGAATACC GATGAGATTG ACTACATTAA TGCTCACGGC
ACCAGCACTG AAGTGAATGA CAAGGTCGAG ACGCTGGCCA TTAAGCAGAC CTTTGGTGAG
CAGTCCTACA AGATCCCGGT TTCGAGCATT AAGAGCATGA TGGGTCATTT GATTGCTGCC
GCCGGGAGTG TGGAGGCAAT TACCTGCCTG CTGTCGATTC GCGATGGTGT GGTACCACCG
ACGATTAACT ACACCACTCC TGATCCCGAT TGTGATCTGG ATTACATTCC GAATGCTGCT
CGTGAGCGGA AAGTTCGCCG GGCGTTGTCG AACAGCTTTG GATTTGGTGG TCAGAACGTT
TCGCTGATTT TCTCGGAGTA TAAGGCGTAA
|
|---|
| Protein sequence | MRRRVVITGI GAITPIGNSI EEMWKAQQEA KCGISTITHF DASRFPTTFA GEVKGFKLEN
YVADTTPFQF SGKNIHYALG AARQAYDDSG LSDSDLDPGR LGVYLGAGEG QQDFLMIMSI
IAQAQNTATG EVDLEVFTRE GLARMHPQKE MEQEPNMTAG HLAAVFNAQG PNLNCLTACA
ASSQAIGEAT EIIRRGDADA MISGGAHSMI HPFGVTGFNL LTALSTRNSS PQTASRPFDK
DRDGFVLGEG AGILILEELE HAKKRGAHIY GEVVGYGSTA DAYRITDIHP EGRGAIACMK
MALQDAGLNT DEIDYINAHG TSTEVNDKVE TLAIKQTFGE QSYKIPVSSI KSMMGHLIAA
AGSVEAITCL LSIRDGVVPP TINYTTPDPD CDLDYIPNAA RERKVRRALS NSFGFGGQNV
SLIFSEYKA
|
|---|
| |