Gene Plim_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3119 
Symbol 
ID9139833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4038755 
End bp4039525 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content54% 
IMG OID 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_003631133 
Protein GI296123355 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.770034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCGAA TGACTCGCAA TCACCCGGTT TTGATGCGTC AAACCGTTTG GACAATTCTC 
AGTTTTGTAC TGCTGGGTTC TGGACTGGCC TGTGATTCTT CACCAGTGAT GAAGGATGCG
AAGGCTCCCG TCGCACCGGC TCTCGAAGGT GCGAATGCTG AGCCGTTAAC ACCGGATGAT
GAGCGGGCAC CGGATCTGTT TGAAGTGCTC CTAACGACAA CCAATGGCGA TGTCGTCGTG
GAAGTGCATC GCGACTGGGC TCCGCGCGGG GCTGATCGGT TTTACACACT CGTGAAGAGT
GGTTTCTACG ACAACGCGAA ATTCTTCCGA GTGGTCCCTG GATTCGTGGC TCAGTTCGGG
ATTGCGGCTG ATCCTCAGGT GCATGCCAAA TGGAATGCTG CTCCACTGCG GGATGACCCC
GTTAAGCAAA CAAATGGCCG AGGAACGGTC ACGTTTGCGA CATCGGGGCC CAATACTCGC
ACGTCGCAGT TGTTTATCAA TTTTGCTGAT AACAGCCGGC TGGACTCGAT GGGCTTCAGT
CCCTTTGGCA TTGTGACCAA AGGGATGGAA TACGTTGATC AGATCAACCC GGAGTATGGC
GAATTTCCAC AGCAGCCACT GATTGAGAAG CTGGGCGATA CTTATCTGTC GAAGGAGTTT
CCGAAGCTCG ATGGGATCAT TTCTGCCAAG GTTCTGACGC CGGAATCGGC AAAACCTTCA
GCGGATCCAC AGCCGGCAAC CACAGAGACC ACAGAGTCGT CTAAGCCATA A
 
Protein sequence
MLRMTRNHPV LMRQTVWTIL SFVLLGSGLA CDSSPVMKDA KAPVAPALEG ANAEPLTPDD 
ERAPDLFEVL LTTTNGDVVV EVHRDWAPRG ADRFYTLVKS GFYDNAKFFR VVPGFVAQFG
IAADPQVHAK WNAAPLRDDP VKQTNGRGTV TFATSGPNTR TSQLFINFAD NSRLDSMGFS
PFGIVTKGME YVDQINPEYG EFPQQPLIEK LGDTYLSKEF PKLDGIISAK VLTPESAKPS
ADPQPATTET TESSKP