Gene Plim_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3116 
Symbol 
ID9139830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4035211 
End bp4036464 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content54% 
IMG OID 
Producttryptophan halogenase 
Protein accessionYP_003631130 
Protein GI296123352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.406166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAGA GCCTTGATCC TGAAGTGATT GTGATTGGTG GTGGCCCGGC GGGTGCAACA 
GCGGCGACAC TTCTGGCGCA GGCTGGTCAT CGCGTGCAGT TGTTCGAGCG GGAAGTTTTT
CCGCGATTCC ATATCGGGGA ATCGCTGATT CCCTGCACCT ATGGAGTTTT TGCACGCACG
GGGCTGCTCG AGCGACTGAA AGACAGCCAC TTCGTTAAGA AATACAGCGT GCAGTTTGTG
AGTGATACGG GCAAAGTCTC GGCTCCATTT TTCTTTACAC AGTACAAGCC CGTCGAATCT
TCGCAGACAT GGCAGGTGCG CAGAGCCGAT TTTGATCTGA TGCTGCTGGA TCACGCTCGC
GAGGCGGGCG TGCAGGTTCA TGAGAATCAT CGTGTGCTGG AAGCGATCTT TGAAGACGAT
CGATGCGTGG GAGTACGCGT CAAAAATGAG GCGACCGGTG AAGAGCGTCA GGTGCGAGCC
CAGGTGGTGA TTGATGGGAG TGGCCAAAGC TCAGTGCTGC TCGATCGCCT GCAATTGAGG
ACATGGGATA GCGAACTGAA AAAAGCCGCC GTCTGGACCT ACTACAAAAA TGCCTGGCGA
GATGAGGGTG AGAATGGCGG TGCAACCTCT GTCATTCAGA CAGAAGGTAA GAAAGGCTGG
TTCTGGTACA TCCCGCTGCA CGACAACATT ACCAGTGTGG GTGTTGTCGC AGATTTCTCG
CATCTTTTTA ACAAGCAGCG CACAAAAGAC CTGGGAGAAC TCTTCCAGGA AGAGGTGGAT
CACTGCCCGG GTGTGAAAGT TCGATTGGAG GGTGCCGAGC GATGTGATCA GTATCGGGCT
GCCAAGGAAT ATTCCTATCG GGCAAAGCAG GCAGCAGGGC AGGGGTGGGT GCTGATTGGT
GATGCCTATG GTTTTCTCGA TCCGCTCTAT TCTTCCGGTG TGTTGCTGGC CGTGAAATCG
GGTGAACTGG CGGCTGATGC CGTCCATCAG GGCTTGGTCA CCAATGATTT AACCCGTACG
ACACTCGGTG CCTGGGAGCC CGAGTATGTG CTAGGCATGG AGCGGATGAG AAAGCTGGTG
CTGGCCTATT ATAAGGGTAT GAACTTTGGC AAGCTGATCA TGAAGTATCC GGAAACCAAG
GACGATATTA CGGATCTGCT GATGGGCGAT CTCTTCCGCG CTGAACTGGA TCTAACACTC
GATAAAGTCG ATTCAATGCT CGAGGAAATG GCTGCCCAAC CCGTGGTCGC CTGA
 
Protein sequence
MIQSLDPEVI VIGGGPAGAT AATLLAQAGH RVQLFEREVF PRFHIGESLI PCTYGVFART 
GLLERLKDSH FVKKYSVQFV SDTGKVSAPF FFTQYKPVES SQTWQVRRAD FDLMLLDHAR
EAGVQVHENH RVLEAIFEDD RCVGVRVKNE ATGEERQVRA QVVIDGSGQS SVLLDRLQLR
TWDSELKKAA VWTYYKNAWR DEGENGGATS VIQTEGKKGW FWYIPLHDNI TSVGVVADFS
HLFNKQRTKD LGELFQEEVD HCPGVKVRLE GAERCDQYRA AKEYSYRAKQ AAGQGWVLIG
DAYGFLDPLY SSGVLLAVKS GELAADAVHQ GLVTNDLTRT TLGAWEPEYV LGMERMRKLV
LAYYKGMNFG KLIMKYPETK DDITDLLMGD LFRAELDLTL DKVDSMLEEM AAQPVVA