Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3101 |
Symbol | |
ID | 9139814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4014527 |
End bp | 4016977 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | flagellar hook-length control protein |
Protein accession | YP_003631115 |
Protein GI | 296123337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.964976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCC GTGATCCTCG ACGATGGACT GCTCCAGGAT TGGCAGGATT CCTCGCGACA CCCGCCAATT CTGCCGAAAG CGACTCGCTC AAGGCCGAGG GTTCACAAAC TTCGTCTTCT TCCGAATTCA GTGCTAGTCT GCTCCGGCAA TACCTGCTGA ATCAGGGAAC CCTTGCTGAG ACTCTCACAA GCCAGAAAAG TCTGACCGGC GCGAAAGGTC TAACCAGCGA CAAAAGCGAG GCCAGCAAGC AATTCGACGG AAGATCCTCA GTGACTGGAA ATTCACAGTC GAGCTTGCGC AGCCTTGCTG ATGATCATCG CCTCTCTCAG AAGGCACGCT CACGCCATTC GGACGATGCC GAGCCATCGT TCATGGATCG ACTTATCGAT CGTCGCACGG AGGCAACACA GCGTAACGAC GAATCGACAG TCCGTTCTTC CACACTCCAG GAACATTTGA GCAGGGATGA ACGCCAGGCT TTACCGGTAG ATCGCGAACA GGATTCGTCT GATACGGATC GAACAGCACC TGCCTCTTTG CAGGAGAACT CTGAAACGCA GGTTGATCGA ATAGAGCCAT TTCGACAAAA CCTTGTTGAT GTCTCTAATG CCGGAGTTGA GGCAAATTTC ACTGAAGAAC ACAGCCTTGC TGAAAAACTG ACAGTTGAGG CGGCAGAATC GATCTCTGTG ATCGACCACG AGAACCTGAC GCACGCCAAT TCCAACAGTT CTGACTTTGC TGCGGAAAAT GCCGCTCTAA ACGTCTCTAA CAGCTTCGCG GGATCCGAAA TTCAGGTTCC ATCGAGCGGA ATCGTTCCAG TCGATGACGA GCTTAACCTC GTCACACAGG AACCGGATTC TGTGCCCGCA AACGTCGCCC ATCCTGCTGC TGCCAATCAA TATCACCACA TCGCCTCCCG GCTGGTGAGC ACAAAATCGA CTGATGCAGC CTCGATTCGC TCACTGCAAT CTTTCCAGCA ACTCCTGGCG CAAGATCCCT CATCGCAGTC AATTTCTGGC AACACCTCGT CTGCTGTCAC AAGCGATGAG ACGAATTCCG CGACGGCTGG GGAACTGCAA CCAGCGGTTA ATGATCAATC GTCTCAATCG ACAGCGAACC CTGACGATGT GACGATCGAT TCTTCGTCAA CAGATCTCAC GTCGAGCGAT ACCACCTCGA TTTCGTTAGC CGGTCTCTCT GCCGGAGTAT TGCCACCGGC AATGACCACT CACGAACAGC GATCAAATTC TCAAGGTGCA GGTGACGAAC TGGCAGCAGG ACAGGTGCCA GGGAATCGTC AGGGAGAAGC TGGAGCATTG ATCCTGAATT CTTCGCAGAC TGACGAAACC TCGCTGGCCA CTTCAAGCTC GATTCCAGTG AGCGCCAACA CTGATCCACA GATCTCAGCC ACACCCAGTT TGCAGGCTCA GTCCGAATCG ATCATCAACC AGCGGTCGGT TTCGGGAGAA ACTTCCCGTT CCCAGATTTC CGGGGCTCGC AATGGCAACC AGTCTTTCAG TCAGCGGCAA ACTTCGTGGA GTGCCGTGGG CGGATTGCCA CCGTGGAGTT CTTTGCCCGG ACTTGGCGAT GCTTCTACGG GCTCTTCGTT CAGTGCGAGT CTGAATCTTT CATCCCGCGC CGGGGCATCC CCAGGCACAT TCGCGGCAGC TCTGGCAGGT TCCCAAAATC CCGCCATGGG CCAGATCGCA GAAGCATCTC CCGCAACGGT TGCTGATGCG GAAACCACAA TACAAACAGT CGCCAAACAT CCGGGAGCCG GTGGGCCGGC AGCGAATCTG ATAGCCAACA ATGATTCTCA GACCCGCCAG GCAAGCACAA TCACATCAAA CAGCACACAA CCACCCTTTG CGCAGAGAGT TGTCGTTGAT GGCATCTTGA ACATGACGGC CAGCCATATT CTGAACTCGG CACGAACCGA GCAAACGTTT TCGATTGTCC TCACCCCTGA AAGTTACGGC GAATTGTCGA TCGATGTCCG CCAGAATGAA GAGGGAGTGA TGGTGCGGCT GGAAGCGGCC ACATCGGCGG GGCATGAGTT ATTGAGCGAG CATCTTTCCG AGCTGCGCGA AATACTCGAC CAGCGTGGAT TGGATGTTGA TCAGATCTCG CTTGAACGCG TCGAAACTCC CCGAGAAGTC ATCGCGACCA GCGATCCAGC GAACGATCGA TCATCGAATC GTGAACAACC TGATTCTACG GGCCAGAATC TCCTGACAGG CCAGGAAGGT TCTTCGAGTT CGGGCAGCGA TCGTCAACCA GATTCTGGCA CTCCTCGCGA AAATTGGAAC CGACTCGATC CACAGGAAGA ACCTCGCACC GACCATCTGG CCCGGAACAA TCAGGAAGCC AGATCGACAC AATCTTCCGG ATTTGCTAAT GAAGGGACTG CGAGACCTGT CCGCTGGGAT CACGTGAATA TCCAGATTTG A
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Protein sequence | MEIRDPRRWT APGLAGFLAT PANSAESDSL KAEGSQTSSS SEFSASLLRQ YLLNQGTLAE TLTSQKSLTG AKGLTSDKSE ASKQFDGRSS VTGNSQSSLR SLADDHRLSQ KARSRHSDDA EPSFMDRLID RRTEATQRND ESTVRSSTLQ EHLSRDERQA LPVDREQDSS DTDRTAPASL QENSETQVDR IEPFRQNLVD VSNAGVEANF TEEHSLAEKL TVEAAESISV IDHENLTHAN SNSSDFAAEN AALNVSNSFA GSEIQVPSSG IVPVDDELNL VTQEPDSVPA NVAHPAAANQ YHHIASRLVS TKSTDAASIR SLQSFQQLLA QDPSSQSISG NTSSAVTSDE TNSATAGELQ PAVNDQSSQS TANPDDVTID SSSTDLTSSD TTSISLAGLS AGVLPPAMTT HEQRSNSQGA GDELAAGQVP GNRQGEAGAL ILNSSQTDET SLATSSSIPV SANTDPQISA TPSLQAQSES IINQRSVSGE TSRSQISGAR NGNQSFSQRQ TSWSAVGGLP PWSSLPGLGD ASTGSSFSAS LNLSSRAGAS PGTFAAALAG SQNPAMGQIA EASPATVADA ETTIQTVAKH PGAGGPAANL IANNDSQTRQ ASTITSNSTQ PPFAQRVVVD GILNMTASHI LNSARTEQTF SIVLTPESYG ELSIDVRQNE EGVMVRLEAA TSAGHELLSE HLSELREILD QRGLDVDQIS LERVETPREV IATSDPANDR SSNREQPDST GQNLLTGQEG SSSSGSDRQP DSGTPRENWN RLDPQEEPRT DHLARNNQEA RSTQSSGFAN EGTARPVRWD HVNIQI
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