Gene Plim_3088 details

Gene Information

• Locus tag: Plim_3088
• ID: 9139800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3999600
• End bp: 4001729
• Gene Length: 2130 bp
• Protein Length: 709 aa
• Translation table: 11
• GC content: 54%
• Product: protein of unknown function DUF927
• Protein accession: YP_003631103
• Protein GI: 296123325

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGATTTC TTCAACTCGT ACTGCGTGTG CTCACGCCGA TTGTCCACAC TTTCCCATGT 
TTCCACGGTG CTATTCCGAC TCCAAAGTCA TTGCGCCTAG AAAAGACGAT GATGATTGCA 
TCAAATTCGA ACAACGATTC CCGTCTTTCT GCTCAAGTTC CACCGGAATC TGAAGCCTCA 
TTATGGGGAA CTCTCTTGCC GGGAATGAGC CCGTCGAATC CGGGGCCTGA TACCAATCCA 
CCCAGTTCCG AAGCCAATCA GCACGCTTCG AGTTTCAATC GCCCAGAGTC TGACCCTGAG 
CAAAGCGGCC CAAGACGCAT TCGTGAAATC TTGCGGCAGC TGGATATTCA CGACAATCGC 
ATCTCCCTTG CCGAAGATAT GGAGCTTCCG CAAAACTGGT CAATCAACTT TGATTCAAGT 
ATGCCCGTTC TTGAAATGAG ATCCGCGACC AGACGAAACG CCGAAGTTGA GAGCTTACCA 
CAGTTGGCTT GGCTGTCCGA AATTCGCATC GATTCGATAA ATAGAGAACA GGCTGTCGTT 
GTCCAGTGGT TAGACGACGG TCGATTAGAT CAACGTGAGA TTTCTCGTCG AAGTCTGGCT 
GATTCGAGAG GAATCTTGGA ACTTTCCCGT TTCGGGATGA ACGTGAACTC TTTGAATGCT 
CGTCGATGGG TCGGGTACTT TGGTGATTTC CTTGGTGACA ACAGCATGGT CCTTCCTCAT 
CGTCAGGTAC TGAGACAGCT GGGGTGGGAA AGAGATCTCA ATCAGTTTGC GTGGGGACGA 
ACTCTTATCG CGGCCACACC TGAGGAACCA GACGGTATTG ACGTCGTCAT GCCCGATGAC 
GGTTTCGACA GCGCTCTCGA TGCCTTTGTG GCTGGAGGAA GTTTTGAAGA GAGCCTCGCA 
CTTTTCCGTG AGGTAGCTGA GTCTCCGATC GCTCGTTTCA TGCTCTACTC GTCGCTGGCA 
AGCGTCCTGC TCCCAATACT CCAGCGCCCC GGATTTGTGG TCGATTTATC AGGAACCACG 
AGCCTAGGCA AAACCACGAC ACTTGAAGTC TCGGCAAGTG TTTGGGGGCG GCCTGATGCC 
CAGGCGACTG GTGCAGCCCT GATCCATTCC TGGAACCAGA CACGTGTCTT CGTAGAGCGC 
AGGGCCGCTT TCCATAACCA TTTGCCGTTA TTCCTGGATG ACACCCGACA GGCCAGAAAT 
GACCAGATCA GCCAAATCGT TTTTGACCTG GCGAATGGAA TCGCTCGCGG AAGAGGAACT 
GTTGCCGGAG TCCAGCAGAC AGCGAGATGG AGACTGATTG CTCTTTCAAC GGGCGAGCAA 
GCGCTCACCA GCTTTGAAGA GCAGGGGGGG ACCTGGGCAC GAGTCGTTCC ACTCAACCGT 
CCGCCCTTCG CCAATCTGAT CAGCAATGCT CGAGAAACGG TCGATGGCTA TAGATCACGG 
GCTAATCGCC ATTTCGGCCA TCTGGGACCA CGGTTTGTGC GACAGGTTCT TCAGCAGCAA 
GCGAGTTGGG AACAGTGGCG GGAACGCTAT CGTGAGATTC ACGAGACGCT GGCACATTCC 
GTCCAGAACA ATCCGGTTGC GGGACGAATG GCGGGCCATC TCGCGGTCGT CGAACTCGCC 
GCCGAGCTGG CAGGAGAACT CTTCGATCTT CCAGAGAGAC TCCGGCATCC GGGCCGGGAT 
CTTATGGCCC TGCTGGCTGG TGAATTGATC GAAACAGATC GCCCCCTTGA GGCACTGCAT 
CACGTCCTTG ATGAGGTTGG CCGACGGTGG TTCTTTCCAG TTAACAATAT GGCTTCACTG 
CAGGAGGGTC TGTTCCGATC ATCCGAAGGT CAGGGAGACA TTGTTGGACG TTGGATCGTA 
ACGCGTGACG ACGCTAATCG ACGTCCATCT CTGGCCCTTA CTCTCACCGA ACTGGAAAGA 
ATTCTTCAGT TAAGAGGCTT CAATTTCCAG GAGACAATCG CAGCATGGAG AAATCTTGGC 
TGGCTTCATG TCAGCGGGGG TCGTGGGAAC CTTCAAATGG TGCGATTGTC GAGAAATGGC 
CCTACAGTAC GAATGGTCTG CCTGAAAGGC AGCATTCTGG CGCCTCTGTT GGAAGAGCGA 
GCCGCAGGCA CGGAGGAAGT ACCGGAGTGA 

 

Protein sequence

MRFLQLVLRV LTPIVHTFPC FHGAIPTPKS LRLEKTMMIA SNSNNDSRLS AQVPPESEAS 
LWGTLLPGMS PSNPGPDTNP PSSEANQHAS SFNRPESDPE QSGPRRIREI LRQLDIHDNR 
ISLAEDMELP QNWSINFDSS MPVLEMRSAT RRNAEVESLP QLAWLSEIRI DSINREQAVV 
VQWLDDGRLD QREISRRSLA DSRGILELSR FGMNVNSLNA RRWVGYFGDF LGDNSMVLPH 
RQVLRQLGWE RDLNQFAWGR TLIAATPEEP DGIDVVMPDD GFDSALDAFV AGGSFEESLA 
LFREVAESPI ARFMLYSSLA SVLLPILQRP GFVVDLSGTT SLGKTTTLEV SASVWGRPDA 
QATGAALIHS WNQTRVFVER RAAFHNHLPL FLDDTRQARN DQISQIVFDL ANGIARGRGT 
VAGVQQTARW RLIALSTGEQ ALTSFEEQGG TWARVVPLNR PPFANLISNA RETVDGYRSR 
ANRHFGHLGP RFVRQVLQQQ ASWEQWRERY REIHETLAHS VQNNPVAGRM AGHLAVVELA 
AELAGELFDL PERLRHPGRD LMALLAGELI ETDRPLEALH HVLDEVGRRW FFPVNNMASL 
QEGLFRSSEG QGDIVGRWIV TRDDANRRPS LALTLTELER ILQLRGFNFQ ETIAAWRNLG 
WLHVSGGRGN LQMVRLSRNG PTVRMVCLKG SILAPLLEER AAGTEEVPE