Gene Plim_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3032 
Symbol 
ID9139744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3930551 
End bp3931864 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content59% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003631053 
Protein GI296123275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.451614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCA CGATCGAAGC CCCCGCGCCA AGTCAGCAGA TGACGATTAA CCGCAATCCC 
GCTAAAGCCA CCACGCCTGT CTATGTCGTG GGTGCCGGCG TCGTTGGGGC CGCCTGTGCC
CACTATCTCG CCGAGGCGGG TTGCCAGGTC GTGTTGATCG ATCAGGGCGA ATTCGGACGG
GGTTGCTCGC ATGGCAATTG CGGCTACGTC TCCCCCAGCC ACGTCCTTCC GCTCTGCCGC
CCGGGGGCGA TCAGTTCCTC GCTCTGGACA CTCTTCCAAA AGAACTCCCC GTTCAAGATT
CGTCCCCGCC TCGACCTGCA AATGTGGATG TGGTTTTTAA GGTTTGCGTT GCGTTGCAAC
TTCAAGGATA TGCTTAATGC TGGGCAGGCC CGCCATGCGA TGCTGGCTTC CTCCCGGCGG
CTCTATCAGG AATTGATGGA GATCGGCAAG CTGGGGGATT GCGACTGGGA AATGAAGGGG
CTGATGTTCG TCCATCACAA CGAACGCCAT TTCGAACACT TCGAGAAGAC CAACCGCCTG
CTGACCGAAC GATTTGGAGT TTCCGCGGAT CGCCTGGATC GCGACGAACT ACTAAAGCGT
GAACCTGCCC TCAAACCTGT GGTGGCCGGT GCCTGGTACT ACGATTGCGA TGCCCACATC
CGCCCCGACC TGCTGATGAA ATCGTGGCGG AAGCTGCTCC AGCAGCAGGG TGTCGAAATT
CGCGAACATT GCCAGTTCCT CGACCTGGAG GTGCAATCGA AAAAGATCAC CCGCCTGTTC
ACCAGCCGCG GCGACTTTCC TGTCGATCAT GTCGTCTTCG CTACGGGGGC CTGGTCGCGG
CAGTTGCAAA AGAAGCTGGG TGTGGCAATT CCCATCGAGC CGGGCAAAGG CTACTCGATC
ACCATGCCCC GCCCCGCGAT CTGCCCCAGT CATTCGATGA TCTTCGAGGA TCATCGCGTC
GCCGTCACAC CCACCAAGAA CGAATATCGC ATTGGCTCAA CGATGGAGTT CGCGGGTTAT
GACAACACGC TGCGGCCTGA TCGCTTGAGC CTCCTCACTG AAGGAGCCAA GTTCTATCTC
CGCGATCCGC AGACGGAACC GATTGTCGAA CGCTGGTACG GTTGGCGGCC CATGAGCTGC
GATGGCGTCC CCATTGTCGG AAAACTGCCC CGCATGGACA ACGCCTGGCT CGCCGCCGGT
CATAGCATGC TCGGCTTGTC GATGGCGACG GCCACCGGAA AGCTGGTGGC GGAAATGCTG
GCCGGCTCTA CGCCCCATAT CGATCCCCAC CCCTATCGCG TCCATCGCTT CTAA
 
Protein sequence
MSATIEAPAP SQQMTINRNP AKATTPVYVV GAGVVGAACA HYLAEAGCQV VLIDQGEFGR 
GCSHGNCGYV SPSHVLPLCR PGAISSSLWT LFQKNSPFKI RPRLDLQMWM WFLRFALRCN
FKDMLNAGQA RHAMLASSRR LYQELMEIGK LGDCDWEMKG LMFVHHNERH FEHFEKTNRL
LTERFGVSAD RLDRDELLKR EPALKPVVAG AWYYDCDAHI RPDLLMKSWR KLLQQQGVEI
REHCQFLDLE VQSKKITRLF TSRGDFPVDH VVFATGAWSR QLQKKLGVAI PIEPGKGYSI
TMPRPAICPS HSMIFEDHRV AVTPTKNEYR IGSTMEFAGY DNTLRPDRLS LLTEGAKFYL
RDPQTEPIVE RWYGWRPMSC DGVPIVGKLP RMDNAWLAAG HSMLGLSMAT ATGKLVAEML
AGSTPHIDPH PYRVHRF