| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3030 |
|---|
| Symbol | |
|---|
| ID | 9139742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3926218 |
|---|
| End bp | 3928569 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Dipeptidyl-peptidase IV |
|---|
| Protein accession | YP_003631051 |
|---|
| Protein GI | 296123273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTT ATGTCTGGTT GATGATGATG GTGTGGTCTC TGCCCTGCCC TGGGGGCTCG
TTATTGATCA GTGAGGATCA ACCTCCACAA ACCGCGCCTG AGGCGAAAAT CTACCGTGAT
CGGATTTCGC CCACCTGGCT GCCCGACGAA TCGGCTCTGT GGTATCGCGT GGAGGTGGCT
CCGAAGAAGG AAGAGTACAT TCGCATCGAT GCGGCAACAG GCCTCCGGAG TGTTCACAAA
GATTTCAAAT CAATGAATCT GCCAGGCCCT GCGGAGATTC GCACCTCGAC ACTCACGACC
AGCAGACGCA AAGGTCCTGC CGAATCAGAG ATTTCCTGCC ATCTGGAGTT TAAAAATCAG
ATGGATGAAC CAGTCAAACT GGACTGGGTA AAAGCTGAAG GGGAGTCGAT TCCGTATGCG
GTGATCGAGC CAAACGCCAG CCACACCCAG CACACTTTCC AAACGCACCA GTGGATCATC
ACCAGGCAGA ATGGCGAGCC ATTGGCCACA ATATTTGCGG ACCCTGCCAC CCCACGCATC
TTGATCGATG GCATCTCCGG AAAGGCACCG AGGAATTCTC CCTCAAGAAG GCCCAGATCT
TCTGCTCAAG GGTTCTCTCC CGACGGAAAA TGGTTTGCTC GCGGATCAGG GAATCAGGTT
ATTCTCACAA ACGGCGAGAT GCAGGATGAA GTTCGCATTT CGCCGCCAAT CCCGGCAGAT
GCCAAAATCT TTGGGACAGC CTCGTGGTCG CCAAATTCTG AGGCCTTTGT GTTTTCGTCA
GCCATACCTG TCAAGGTGCG GCAAATCTCG ATTGTCGAGA CCTCACCCAA AGATCAACTG
CAACCCAAGG TACGTCAGTT GAACTATGCC AAACCAGGCG ATGAACTGGA CCAGCCAGTC
CCTGTGCTCT TCCGTCTCGA GAACGGCTCC TTTAAGCCAG TCGTGCTGGA TTCGACGCTC
TTTACCAATC AGTTTACCAG TTCGCCCTCG ATGAATTTTC ACTGGTCGGA AGATGGTCGC
GAGTTTTACT TCGATTTTAA TCAGCGGGGA CATCAGTGCT ATCGAATTCT CGCCGTTGAT
GTGAAGACCG GGCAGGTTCG TCCTGTCGTC GAAGAGGTCA GCCCGACGTT TGTCGACTAC
CGCAATCTCT CCTGGCGACA TTGGTTGCCG AAGACGAAAG AACTCCTCTG CAAGAGCGAG
CGAGATGGAT GGAGTCACCT TTGGAAGTTT GATGTTTCCG GGCAGAAGTC ACCTCAACAA
CTGACCTCTG GCCCATGGGT CGTTCGAGAG ATTCAGCGCG TCGACGAAGC ATCAAACACG
ATCTGGTTCA CAGCCAATGG GTTGCGTCCT GAAGAAGATC CTTACCATCT CTATCTCTGT
AAAGTCTCGT TCGATGGCAC CGGTTTTCAA CAGCTCACAC AAGGCGATGG GACTCACGAA
ATTCAGTTCT CTCCTCAATC GACCTACTTT GTCGATACCT GGTCGCGGAT CGATCATCCT
CCTGTGGTTG AACTTCGGAA GAGTGCTGAC GGCCAGTTGA TCTGTGAAAT GGAGCGTGCC
GACGCAACGG CGTATTTAGC CGCAGGCCAC ACCTTTCCGG AAAGATTTGT CGCTACCGGA
CGAGACGAGA AGACCAACAT CTATGGCGTG ATCTTTAAGC CGACAAAATT CGACCCAGCC
AAGAAATATC CTGTCCTGGA AAACATCTAC GCTGGCCCTC ATGGAGCTTT TGCACCCAAA
CGGTTTGGAG CAGCCCGGCA AATGCAATCG TTTGCCGATC TGGGCTTTAT TGTGGTGCAG
GCCGATGGCA TGGGCACCAA CTATCGGGGC AAGACATTTC ATGACGTCGC CTGGAAGAAT
CTCAAAGACT CCGGCTTCCC GGATCGTATC CGTTGGATCA AAGCTGCCGC TGCGACCCGT
CCCTGGATGG ATTTAACCCG CGTGGGAATT TACGGCGGGA GTGCCGGCGG GCAGTCGGCC
ATGAGAGCGC TTCTGGATTA CTCAGATTTT TATCATGTCG CGGTGGCGGA TTGCGGCTGC
CACGACAACC GCATGGACAA AATCTGGTGG AATGAACTCT GGATGGGCTG GCCTGTCGAC
GAAAGTTATG CAGCCAGCTC GAACGCAGTC GATGCCCACA AACTCAAAGG CAAATTGCTG
TTGATTGTTG GCGAACTCGA TTCCAACGTC GATCCTGCCA GTACGATGCA GGTTGTCGCG
GCTTTGCAGA AAGCGGGAAA ATCATTCGAC TTCCAACCCA TCATCAACGC CAACCACGGA
GCCGCAGAAA CACCCGCAGG CAGCCGAGCC CGCAAAGAGT TTCTCATCCG CCACTTGAAG
CCAGAACTTT AA
|
|---|
| Protein sequence | MKAYVWLMMM VWSLPCPGGS LLISEDQPPQ TAPEAKIYRD RISPTWLPDE SALWYRVEVA
PKKEEYIRID AATGLRSVHK DFKSMNLPGP AEIRTSTLTT SRRKGPAESE ISCHLEFKNQ
MDEPVKLDWV KAEGESIPYA VIEPNASHTQ HTFQTHQWII TRQNGEPLAT IFADPATPRI
LIDGISGKAP RNSPSRRPRS SAQGFSPDGK WFARGSGNQV ILTNGEMQDE VRISPPIPAD
AKIFGTASWS PNSEAFVFSS AIPVKVRQIS IVETSPKDQL QPKVRQLNYA KPGDELDQPV
PVLFRLENGS FKPVVLDSTL FTNQFTSSPS MNFHWSEDGR EFYFDFNQRG HQCYRILAVD
VKTGQVRPVV EEVSPTFVDY RNLSWRHWLP KTKELLCKSE RDGWSHLWKF DVSGQKSPQQ
LTSGPWVVRE IQRVDEASNT IWFTANGLRP EEDPYHLYLC KVSFDGTGFQ QLTQGDGTHE
IQFSPQSTYF VDTWSRIDHP PVVELRKSAD GQLICEMERA DATAYLAAGH TFPERFVATG
RDEKTNIYGV IFKPTKFDPA KKYPVLENIY AGPHGAFAPK RFGAARQMQS FADLGFIVVQ
ADGMGTNYRG KTFHDVAWKN LKDSGFPDRI RWIKAAAATR PWMDLTRVGI YGGSAGGQSA
MRALLDYSDF YHVAVADCGC HDNRMDKIWW NELWMGWPVD ESYAASSNAV DAHKLKGKLL
LIVGELDSNV DPASTMQVVA ALQKAGKSFD FQPIINANHG AAETPAGSRA RKEFLIRHLK
PEL
|
|---|
| |