Gene Plim_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3017 
Symbol 
ID9139729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3909632 
End bp3910603 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631038 
Protein GI296123260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000253607 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAG CCAATCGAAA GAAGGTCGCA GTAATCACTT CATATGTTCA GCAATCATTT 
TCCGAAAGTG ATTGGTACGC GATTGGGCAG CTTACAGGTC AACTCAACAC AATCTCAGGT
CACTCGAGGC TCTTGCGAGC GTTGAATTTT GGAGACGACG ACTATTCTGG TTGCGCAGCG
GAAGTTCTTG ACAGAATCTT CTCCGCAAAT GAATCGGCCA TTGATGAGGT GATCGACCAC
TTCGACATCG ACCTTTGGTA CCAGCAGAAA AGTCCTGAAA AGTACAACAG ACTGTTCTCC
GCCGCGGCCT CGTCCTCTGC GGACTTTTGG AAAAGTGGTT TTCTTAAGTT ATTCGTTAGC
CATCTTTCAT CCAATAAGAC TCGAATGTCT GCACTCAAAG CTGGGCTGGC GACTTGGGGA
ATTTCAGCCT TCATCGCACA CGAAGATATC GAGGCATCTC GTGAATGGAG GGATGAAGTC
GAAGCCGGCT TGGAAACGAT GGATGTGCTT GCGGCCGTCG TAGAACCAGG ATTCAAGGAA
TCAGATTGGT GCGTACAAGA GGTCGGTTAC GCCCTAGGCC GCAAAATCGA TGTAATTCCA
CTACGAGCAG GATTAGACCC TTTTGGTTTC TTTGGAAAGT TTCAAGGAAT TCAGATCAAA
GGGCGACTTC CCGAGCAGGT GGCATGCGAT ATTACACAAG TTCTTCTCAA GAAACCTCAA
TATAGAGAGA GGCTCATCCA AAGCATATCA ATAGCCTTTT CAACACTGGC TTCCGAGAAA
AAGATCGAAA ATATTAACAC GCTAGACGAA TGGTCGATTC TTACCGACAT TCAGTTGAAA
ACTGTGGTCG AGCAAGCCGC GATGTCAGGG GCTGAGAAGC AAGCGGCGAA GAATCTGATC
GCTCGCATTG GAGCATTCAA AGCAGCAGAA GTCGAAGTCA ACCTGCCTGA CGACGATGAC
ATTCCGTTTT GA
 
Protein sequence
MNSANRKKVA VITSYVQQSF SESDWYAIGQ LTGQLNTISG HSRLLRALNF GDDDYSGCAA 
EVLDRIFSAN ESAIDEVIDH FDIDLWYQQK SPEKYNRLFS AAASSSADFW KSGFLKLFVS
HLSSNKTRMS ALKAGLATWG ISAFIAHEDI EASREWRDEV EAGLETMDVL AAVVEPGFKE
SDWCVQEVGY ALGRKIDVIP LRAGLDPFGF FGKFQGIQIK GRLPEQVACD ITQVLLKKPQ
YRERLIQSIS IAFSTLASEK KIENINTLDE WSILTDIQLK TVVEQAAMSG AEKQAAKNLI
ARIGAFKAAE VEVNLPDDDD IPF