Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3014 |
Symbol | |
ID | 9139726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3902418 |
End bp | 3904103 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003631035 |
Protein GI | 296123257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.76639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCACG GGATTGCTGC ACTCCTGGGT CGTTCGATGA AACTCGACGC CCGGCAACTG CCACCAAATC TTTTTCGACT GGGATTTGTA CTGGCTCTGT ACGGTGCATT ACTGATTGCA CAGCTCGAAG CAGGGAGCTT CGGTGCTCCC GGGCTGAGGT TCTTTCAGAA TATCGCCTGG TTGAATTTTC TGGTGATTCT CTTCTCGGGA GTGACTTACT TCTCGACAGC CATTACTGAA GAGAAAGAAG AGGCCACTCT GGGCCTCTTG CGCATGGCCG GGATCAGTCC GATTGGAATT CTGCTGGGCA AATCGACCAG CCGACTGATC AGCGCTCTGA TTCTGTTGAC GATTCAAGTT CCCTTTACAC TCTTGGCAAT CACGCTGGGT GGGGCAACTC TCGACCAGAT TCTGGCGGCG TATGTGGCTC TAGGTGCCTT TATTATCTTT CTCGCCAATG CGGGCCTGTT TTCTTCGGTC ATCTGTGCTC GTGGTGGAAC AGCCGCTGCT CTGACCTGCT TCTGGGTTGG TCTCTACTTC ATCATGCCCT GGTTCGCTTT TTACATTTCG TCAGAGATTC GAACTGCCGG TGGCCCGACA ACAACCATCT CGAACTGGGT AGTCGCCACC AGCGATCTGC TGCAACAGAC TTCCGTGGCG AGTGAACTCA GCCAGATTGT CTCTTCGGGC TATGGCGATC TGAGTGATGT TCTCCCTGTG GATGAGGATG GGCAACCGAT TTCCTCCTGG TCATGGGCCG TCTGGCAGAT TCGCTTCAAA ATGCTGGCCA CAACACAGGT CATTTCGAAC ATTATTGGTG GTTTACTCTT CTTTGCGATT TCGTGGATTC TCTTTGACCG GCTGACACGT TACGAACGTC CCGGCTTTGT CGCCGAACGC AATTTGTTCA TGCCGATAAA AATCGGTCGT GCTCAGCGGT CTCCTCTGGG GCAGGCCTGG CAGAACCCGC TCATCTGGAA AGACTTTTAC TTTGTGGCGG GCGGGCCACG ATGGCTCTTT TTTCGACAGT TGCTCATCTG GATTGTGGTG ATTGTCCTTT ATTTCTGGAT GTCATTTGCC GGTGCTTTCG GGAGTGGCAG TTACTTCGAA CTCGACCAGT TGTTCGCGAT CGCGCTGACG ATTTTCATTC TTGTCCTGAT TATCGAAGCC TCGATTTACA GCTCTCGCAT CTTCCAAACC GAATTGCAGA ACCAGACACT TTCGGCATTG CTGATGCTCC CCTGCTCCGT CGCCTACCTG GGTTATTCGA AAGCAGTGGG TTGCCTGCTG GGACTGGTTC CCACGTTCAT CTCGATTTTC TTCGCCTGGG TGGGAATTCT CGCATCCTCG GCGTACGTCG ATCGCACACT CGAATCGACA TTTGAAGTCC TTGGTCAGCC GATAGTCTGG TGTGGAGTCA CGTTGGTGGT GATCTTCCTG AATCTTGTCA CCACGATTTC GCTCTTCCTC AAATGGGGGG CTCTCCCGTT GAGTTTTGTC ATCGTCTTCT TTGGCAGCAG TTGCTGTCCT CTGACATATA TTCTCATGGC CTTTGCCGGT GCCGCCAACG ACCCGCTGGG TGCTGCGGCA GGGATTCTGA TCAACATCAT GGCCATGGCG CTGATCAGCC TGGTCTTCCA TGCCGTCATC GCTTCGCGTC TGCAGGCCCT GGGCAGCAAA CTTTAA
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Protein sequence | MYHGIAALLG RSMKLDARQL PPNLFRLGFV LALYGALLIA QLEAGSFGAP GLRFFQNIAW LNFLVILFSG VTYFSTAITE EKEEATLGLL RMAGISPIGI LLGKSTSRLI SALILLTIQV PFTLLAITLG GATLDQILAA YVALGAFIIF LANAGLFSSV ICARGGTAAA LTCFWVGLYF IMPWFAFYIS SEIRTAGGPT TTISNWVVAT SDLLQQTSVA SELSQIVSSG YGDLSDVLPV DEDGQPISSW SWAVWQIRFK MLATTQVISN IIGGLLFFAI SWILFDRLTR YERPGFVAER NLFMPIKIGR AQRSPLGQAW QNPLIWKDFY FVAGGPRWLF FRQLLIWIVV IVLYFWMSFA GAFGSGSYFE LDQLFAIALT IFILVLIIEA SIYSSRIFQT ELQNQTLSAL LMLPCSVAYL GYSKAVGCLL GLVPTFISIF FAWVGILASS AYVDRTLEST FEVLGQPIVW CGVTLVVIFL NLVTTISLFL KWGALPLSFV IVFFGSSCCP LTYILMAFAG AANDPLGAAA GILINIMAMA LISLVFHAVI ASRLQALGSK L
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