Gene Plim_3014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3014 
Symbol 
ID9139726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3902418 
End bp3904103 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631035 
Protein GI296123257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.76639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCACG GGATTGCTGC ACTCCTGGGT CGTTCGATGA AACTCGACGC CCGGCAACTG 
CCACCAAATC TTTTTCGACT GGGATTTGTA CTGGCTCTGT ACGGTGCATT ACTGATTGCA
CAGCTCGAAG CAGGGAGCTT CGGTGCTCCC GGGCTGAGGT TCTTTCAGAA TATCGCCTGG
TTGAATTTTC TGGTGATTCT CTTCTCGGGA GTGACTTACT TCTCGACAGC CATTACTGAA
GAGAAAGAAG AGGCCACTCT GGGCCTCTTG CGCATGGCCG GGATCAGTCC GATTGGAATT
CTGCTGGGCA AATCGACCAG CCGACTGATC AGCGCTCTGA TTCTGTTGAC GATTCAAGTT
CCCTTTACAC TCTTGGCAAT CACGCTGGGT GGGGCAACTC TCGACCAGAT TCTGGCGGCG
TATGTGGCTC TAGGTGCCTT TATTATCTTT CTCGCCAATG CGGGCCTGTT TTCTTCGGTC
ATCTGTGCTC GTGGTGGAAC AGCCGCTGCT CTGACCTGCT TCTGGGTTGG TCTCTACTTC
ATCATGCCCT GGTTCGCTTT TTACATTTCG TCAGAGATTC GAACTGCCGG TGGCCCGACA
ACAACCATCT CGAACTGGGT AGTCGCCACC AGCGATCTGC TGCAACAGAC TTCCGTGGCG
AGTGAACTCA GCCAGATTGT CTCTTCGGGC TATGGCGATC TGAGTGATGT TCTCCCTGTG
GATGAGGATG GGCAACCGAT TTCCTCCTGG TCATGGGCCG TCTGGCAGAT TCGCTTCAAA
ATGCTGGCCA CAACACAGGT CATTTCGAAC ATTATTGGTG GTTTACTCTT CTTTGCGATT
TCGTGGATTC TCTTTGACCG GCTGACACGT TACGAACGTC CCGGCTTTGT CGCCGAACGC
AATTTGTTCA TGCCGATAAA AATCGGTCGT GCTCAGCGGT CTCCTCTGGG GCAGGCCTGG
CAGAACCCGC TCATCTGGAA AGACTTTTAC TTTGTGGCGG GCGGGCCACG ATGGCTCTTT
TTTCGACAGT TGCTCATCTG GATTGTGGTG ATTGTCCTTT ATTTCTGGAT GTCATTTGCC
GGTGCTTTCG GGAGTGGCAG TTACTTCGAA CTCGACCAGT TGTTCGCGAT CGCGCTGACG
ATTTTCATTC TTGTCCTGAT TATCGAAGCC TCGATTTACA GCTCTCGCAT CTTCCAAACC
GAATTGCAGA ACCAGACACT TTCGGCATTG CTGATGCTCC CCTGCTCCGT CGCCTACCTG
GGTTATTCGA AAGCAGTGGG TTGCCTGCTG GGACTGGTTC CCACGTTCAT CTCGATTTTC
TTCGCCTGGG TGGGAATTCT CGCATCCTCG GCGTACGTCG ATCGCACACT CGAATCGACA
TTTGAAGTCC TTGGTCAGCC GATAGTCTGG TGTGGAGTCA CGTTGGTGGT GATCTTCCTG
AATCTTGTCA CCACGATTTC GCTCTTCCTC AAATGGGGGG CTCTCCCGTT GAGTTTTGTC
ATCGTCTTCT TTGGCAGCAG TTGCTGTCCT CTGACATATA TTCTCATGGC CTTTGCCGGT
GCCGCCAACG ACCCGCTGGG TGCTGCGGCA GGGATTCTGA TCAACATCAT GGCCATGGCG
CTGATCAGCC TGGTCTTCCA TGCCGTCATC GCTTCGCGTC TGCAGGCCCT GGGCAGCAAA
CTTTAA
 
Protein sequence
MYHGIAALLG RSMKLDARQL PPNLFRLGFV LALYGALLIA QLEAGSFGAP GLRFFQNIAW 
LNFLVILFSG VTYFSTAITE EKEEATLGLL RMAGISPIGI LLGKSTSRLI SALILLTIQV
PFTLLAITLG GATLDQILAA YVALGAFIIF LANAGLFSSV ICARGGTAAA LTCFWVGLYF
IMPWFAFYIS SEIRTAGGPT TTISNWVVAT SDLLQQTSVA SELSQIVSSG YGDLSDVLPV
DEDGQPISSW SWAVWQIRFK MLATTQVISN IIGGLLFFAI SWILFDRLTR YERPGFVAER
NLFMPIKIGR AQRSPLGQAW QNPLIWKDFY FVAGGPRWLF FRQLLIWIVV IVLYFWMSFA
GAFGSGSYFE LDQLFAIALT IFILVLIIEA SIYSSRIFQT ELQNQTLSAL LMLPCSVAYL
GYSKAVGCLL GLVPTFISIF FAWVGILASS AYVDRTLEST FEVLGQPIVW CGVTLVVIFL
NLVTTISLFL KWGALPLSFV IVFFGSSCCP LTYILMAFAG AANDPLGAAA GILINIMAMA
LISLVFHAVI ASRLQALGSK L