Gene Plim_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3013 
Symbol 
ID9139725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3901268 
End bp3902350 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003631034 
Protein GI296123256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.978748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATG ATGAAACTCA GGCGGTCCCT CCTGATCAAG TCCAGCAGCC GACTCCACTG 
GACAATGAAG ACTTTGAAAA AGCGGCGTCT TCTCCCGCTG GTGCTGCTGA AGAGGCGTCA
GATCAGATTG CCTGGGCCGA TCCCAACCAT GCGATCTCGC TGCATAACGT CACGCATCGT
TATCAGGGAA AGAAGGCTCT GGATCGCGTC TCATTTGTCG TTGAAAAAGG AGCGCTGCAT
GGGTTCGTCG GGCCCAATGG AGCGGGTAAG ACCACTTCGC TGAAACTGGT CTGCACGTTA
TTGCAGCCAC AAGCCGGGCG CGTGCGCGTC TTTGGCGAAG ATGTCGTCGA TAACATTCGT
AAAGTCCGCA CGATGATCGG CTTCATGCCC GATCACTTCA GTACCTACCG GCAGATGACT
GTCAACGAAT ATCTCGATTT CTTTGCAGCG GCCTATGGGT TGCCACCAGC CCGCCGCATC
GAAGTGATCG AGCAGGTGCT GTCGCTGGTG GATATGAACC ATCGCCAGAA CGATCTGATC
AGCGGGCTTT CGCGAGGCAT GCAGCAACGC GTGGGGTTGG CGCGAGTGCT GGTCAATGAT
CCGGAACTTT TACTGCTCGA TGAACCAGCT TCAGGGCTGG ATCCGCGAGC ACGTATTGAG
TTGATGGATA TTTTGAGAGC CCTGCGGAGC ATGGGCAAAA CAATCTTCAT CAGCTCGCAT
ATTCTTTCGG AACTGGCCGA ACTGTGTGAT GCCGTCACGA TCATCGACCG GGGAGAAATT
CGCTTCTCAG GCCGCATTGG TGATCTGCTG ACCAATCCCC AGAATCGCCA CACGTTGCGA
TTCGAGTTTG CTCCTGGTTC ACCCGAAATG CGAGAAGCTC TGGCTCAGAT CGAAGGGGTT
GTTTCGGCGG AAAAATCGGG CGAAGGGGCC GGCTATCGCG TCGAGTTTGA TCCTGCCCGG
CTCGATGCCA ATCAACTCGT CGTGCGCGTC GCTTCTCTGG GTGTCCCGCT GGTCAGCTTC
AGTGAAGATC GGCGACAACT CAACGAAGCC TTCATGGATC TGACAACGGC TGGTGTTCGT
TAA
 
Protein sequence
MSDDETQAVP PDQVQQPTPL DNEDFEKAAS SPAGAAEEAS DQIAWADPNH AISLHNVTHR 
YQGKKALDRV SFVVEKGALH GFVGPNGAGK TTSLKLVCTL LQPQAGRVRV FGEDVVDNIR
KVRTMIGFMP DHFSTYRQMT VNEYLDFFAA AYGLPPARRI EVIEQVLSLV DMNHRQNDLI
SGLSRGMQQR VGLARVLVND PELLLLDEPA SGLDPRARIE LMDILRALRS MGKTIFISSH
ILSELAELCD AVTIIDRGEI RFSGRIGDLL TNPQNRHTLR FEFAPGSPEM REALAQIEGV
VSAEKSGEGA GYRVEFDPAR LDANQLVVRV ASLGVPLVSF SEDRRQLNEA FMDLTTAGVR