Gene Plim_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2979 
Symbol 
ID9139691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3856458 
End bp3857450 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631000 
Protein GI296123222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCC AACAGATGAC TGGAAAGAGG GCTTTACCAA CGGCTGGTCA GTTTCTCTGG 
TGCATCGCAG TGATCTGCAG TCTGACGCTG GGCTCGACCA CGACTTTTGG TGCTGACGGT
GGAGTCGTTG CTCAGCAGGA GGGAGATCAG ATTGCGATTA CCATTGATGG GCAACCCTTT
ACCACTTTGC ATTTGGGAAA GGATTTGAAA AAGCCCTATT TCTGGCCACT CCTGGCTGCC
GATGGGGCCA TACTCACCCG GCCCATTGAA CCGGGCGAAA AAGAGCATCC GCATCATAAA
GGATTGTGGA TCAGCATCGA TGAAGTGAAT CACAGTAAGC ACTGGATGGA GAGAGAGCCC
ATCGTGAATC GCGGGGCGAC GATCGAGAAG GCGGCTGGCG AAAAGGTGGT GATTCGACTC
GAAAATGAGT GGCTTAATGG AGAAGGGCAG GCCCAGCTGC GAGAGACCAC ACGGTGGACG
ATCACCAGGA ACCGCCTGAT TGCAGCAGAG ATCCTGCTGG AACCATTGGT TGATGATGTG
GTTATGGGAG ATACCAAAGA AGGATTTTTC GCTGTTCGAA TTGCTCAGAC AATGCGGGAA
CTGCAGGGAG GAAAAATCCT GACTGCCAAC GGGAAGACCA AAACCAAGGA GGCCTGGGGC
AAGCCAGCGC CGTGGATTGA TTACTCCGGA AAGGTGAACG AAAAAACTTA CGGCGTGACA
ATTCTCGATG ACTCGGCCAA CTTTCGCCCC GGCAGATACC ACGTTCGGGA CTATGGTCTG
TTCACCGTAA GTCCTTTTGG AGAAGGGTCT TATCAGAATG ATATGACGCT GGCAAGACCC
GTGGTACTGG CGGCAAGGGG AGCATCTCAA ACCGTCAAGC TGCGGTACGG CTTATGGGTT
CATACGGGGA TTCCGTCGGC TGAAGAGATT CAGAAAGTCT ACGAAGGATT TGTGACAGAA
GGTCGCCCAG AGAATCTGAA AAAGGCTGGT TGA
 
Protein sequence
MTFQQMTGKR ALPTAGQFLW CIAVICSLTL GSTTTFGADG GVVAQQEGDQ IAITIDGQPF 
TTLHLGKDLK KPYFWPLLAA DGAILTRPIE PGEKEHPHHK GLWISIDEVN HSKHWMEREP
IVNRGATIEK AAGEKVVIRL ENEWLNGEGQ AQLRETTRWT ITRNRLIAAE ILLEPLVDDV
VMGDTKEGFF AVRIAQTMRE LQGGKILTAN GKTKTKEAWG KPAPWIDYSG KVNEKTYGVT
ILDDSANFRP GRYHVRDYGL FTVSPFGEGS YQNDMTLARP VVLAARGASQ TVKLRYGLWV
HTGIPSAEEI QKVYEGFVTE GRPENLKKAG