Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2974 |
Symbol | |
ID | 9139686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3847531 |
End bp | 3849462 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | metallophosphoesterase |
Protein accession | YP_003630995 |
Protein GI | 296123217 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.668826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTCCA CACGATCCTC CTGGTTCCGG CGGCATCTGG CCACACGGCT TTGTTTCACA CTTTGTCTAT CGGTTGTCAT CATGGGCAAC TCTTTACTGG CCCATCCGGA TCTCGAAGAA GATGGCCTGC TGACACATTT TGTGGTTGGT GGTCATCGTA TTGAAAATGG CCGTGTCGAA GACCAGACCC ATTCGGCCAA AGCCACGCTT GTCGGTAAAC CCCAGCCGGT CACCATCGGC CCAGCCGAGG GGTTAGTCTT CAATGGAAAA GACGAGTACC TGCTGATTGC CGAGAATGTG GCAGCGGCTG GCAAGCTGCT CCCCAAAAAA GAAATGACTG TCTCGGCCTG GGTGAACCTC AAATCGATAG GCCAATGGGG AGCCATTGCC GGCTGCCTCG AAGATACTGG CAATTACGAG AAGGGCTGGC TCCTGGGCTA CGAAAATGGA AAATTCTCCT TCGCCCTCGC CAGTAAAGGG AGTGATGACG GCAATGGCCT GATGACCTAT CTGACAGCCA AAGAATCCAT CGAACTGGGC CGCTGGTACC ACATTGCCGG ATCCTACGAT GGCCAGACGA TGAAGCTCTA CGTCAATGGC AAGCTGGCTG GTGAATCCAA AGCACAATCT GGTGAGATCC TCTATGAACC CAAGTCAGCT TATGTGATCG GGGCTTACAA GGATTCCAAC GAATTTCACG GCTGGGAGGG CGCTTTTCAG GAAGTGAAAG TCTACAGCCG GGTGCTACCT GCCAACGACT TTGCAGCGGT CGCCAAAAAG AACGAGAACC TGATCAACTG GAACCCTCCC AATAACACCA AGCTCGAATT TCTCGTGAAG CCTTACCTGC AGCATGTGAC TTCCACATCG ATTGTGGTCA TGTGCGAAAC ATCGCGACCG GCCATCACAA AGGTCAACTT TGCCTTACGC CAGCCAATCA CTTTGAAGGC CGCCAGCGAA ACGTTATCGC TGATTCAGGA AGTCCCTCTC AAGGATCTAT CGCCCGGGTC GATCTACTAC TATCAGGTGC AGTGCGAATC TCCCGATGGT CAATCGATCC AAAGTGAAAT TTACAGCTTT CAGACAGCCT TTGGAGCTGA CCGCCCCTGG GCCTTCGGGA TTGTGGGTGA TACCCAGCGC AACCCGGTCA TTACAGCAGC CTGTGCCGAC GGACTCTATG CACTCCGGCC CAACTTCGTC ATTCACTGCG GCGATGTCGT CGATAATGGC TTTGCCAAAA ACCAGTGGAT CAAAGACCTG TTCGAACCCG CCCACAATCT CATGGCACAC ACGGTCGTCT TCCCCACGAT TGGCAATCAC GAACAGAATG CCCACTGGTA CTACGATTAC TTCAGCCTTC CCAAGCCCGA ATACTATTAC ACCTTCACCT ATGGCAATGC CCAGTTTTTC ATGATCGATT CCAACAAGCC TCTCGATCCT GGGTCGGAAC AGTATCTCTG GCTCGAGAAA GAACTGGCGA AGTCGAAAGC CACCTGGAAG TTCACCTGCC ACCATCATCC CTGCTTCACC AGCGATTCGG ACGATTATGG AAACCTGACA ACTGGCGCTG GCGAAAGGCA ACCCACCTAC GGCGACCGCA ATGCCCAGAA ACTCATTCCG CTCTATGAGA AGTATGGTGT AGACATCGCA TGGAATGGGC ACATTCACGT ATACGAACGT ACCTGGCCCA TCTACCAGAT GACCATCAAT CAGAAAAAAG GGGTTCGCTA CATCACCAGT GGCGGCGGTG GCGGTCATCT CGAACAAGCC GCTGCCCAGC GTGCCTGGTT CAGCCTCCAC TTCAAACGAG CTTACCATTA CTGCTATGTC ACGGCCTTCG AGAACACCAT TCAGTTCAAA GCCTACGACA CCGAAGGACG ATTGTTCGAC ACCTTCGAAC TCACCAAAGA CCAGCCAGCC CCAAAGCCAT AA
|
Protein sequence | MASTRSSWFR RHLATRLCFT LCLSVVIMGN SLLAHPDLEE DGLLTHFVVG GHRIENGRVE DQTHSAKATL VGKPQPVTIG PAEGLVFNGK DEYLLIAENV AAAGKLLPKK EMTVSAWVNL KSIGQWGAIA GCLEDTGNYE KGWLLGYENG KFSFALASKG SDDGNGLMTY LTAKESIELG RWYHIAGSYD GQTMKLYVNG KLAGESKAQS GEILYEPKSA YVIGAYKDSN EFHGWEGAFQ EVKVYSRVLP ANDFAAVAKK NENLINWNPP NNTKLEFLVK PYLQHVTSTS IVVMCETSRP AITKVNFALR QPITLKAASE TLSLIQEVPL KDLSPGSIYY YQVQCESPDG QSIQSEIYSF QTAFGADRPW AFGIVGDTQR NPVITAACAD GLYALRPNFV IHCGDVVDNG FAKNQWIKDL FEPAHNLMAH TVVFPTIGNH EQNAHWYYDY FSLPKPEYYY TFTYGNAQFF MIDSNKPLDP GSEQYLWLEK ELAKSKATWK FTCHHHPCFT SDSDDYGNLT TGAGERQPTY GDRNAQKLIP LYEKYGVDIA WNGHIHVYER TWPIYQMTIN QKKGVRYITS GGGGGHLEQA AAQRAWFSLH FKRAYHYCYV TAFENTIQFK AYDTEGRLFD TFELTKDQPA PKP
|
| |