Gene Plim_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2967 
Symbol 
ID9139679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3841225 
End bp3841677 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content56% 
IMG OID 
ProductHelix-hairpin-helix DNA-binding class 1 
Protein accessionYP_003630988 
Protein GI296123210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.938885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCTG AGACCTCGCC CAGTCAACAA AACAGCACGA ATCTGAATGC GCAACCTGGC 
AATAGCGAAA CTACCGCTCG CTATTGCGGC ATGACGCATG GCGATGCCTT GGTGGTTTTT
GGATTGGCTC TTCTGCTGCT CGGCCTCGCG GGTGGGCGAT TTGTGTGGCA TGGAGTGTGG
GGGAATCCAC TGGTGCATGT CGAAACGCTC CAGGGAGAAC CCATTCCGCT GAAGATCGAC
ATTAACTCAG CGAACTGGAT CGAGTTTTTG CAGTTAGATG GAATTGGCGA AACTCTGGCT
CGTCGGATTG TGGCCGACCG TGACGAACGA GGCCCATTCC AGAGCGTTGA CGATCTGGTT
CGCGTCCGTG GCCTGGGCGA AAAAATGATC GAACGCTTTC GCCCCTACCT CACGTGCGAG
CCTCGCCCAA AGTCATCCGT TAACGATCCC TGA
 
Protein sequence
MGSETSPSQQ NSTNLNAQPG NSETTARYCG MTHGDALVVF GLALLLLGLA GGRFVWHGVW 
GNPLVHVETL QGEPIPLKID INSANWIEFL QLDGIGETLA RRIVADRDER GPFQSVDDLV
RVRGLGEKMI ERFRPYLTCE PRPKSSVNDP