Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2967 |
Symbol | |
ID | 9139679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3841225 |
End bp | 3841677 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Helix-hairpin-helix DNA-binding class 1 |
Protein accession | YP_003630988 |
Protein GI | 296123210 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.938885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTCTG AGACCTCGCC CAGTCAACAA AACAGCACGA ATCTGAATGC GCAACCTGGC AATAGCGAAA CTACCGCTCG CTATTGCGGC ATGACGCATG GCGATGCCTT GGTGGTTTTT GGATTGGCTC TTCTGCTGCT CGGCCTCGCG GGTGGGCGAT TTGTGTGGCA TGGAGTGTGG GGGAATCCAC TGGTGCATGT CGAAACGCTC CAGGGAGAAC CCATTCCGCT GAAGATCGAC ATTAACTCAG CGAACTGGAT CGAGTTTTTG CAGTTAGATG GAATTGGCGA AACTCTGGCT CGTCGGATTG TGGCCGACCG TGACGAACGA GGCCCATTCC AGAGCGTTGA CGATCTGGTT CGCGTCCGTG GCCTGGGCGA AAAAATGATC GAACGCTTTC GCCCCTACCT CACGTGCGAG CCTCGCCCAA AGTCATCCGT TAACGATCCC TGA
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Protein sequence | MGSETSPSQQ NSTNLNAQPG NSETTARYCG MTHGDALVVF GLALLLLGLA GGRFVWHGVW GNPLVHVETL QGEPIPLKID INSANWIEFL QLDGIGETLA RRIVADRDER GPFQSVDDLV RVRGLGEKMI ERFRPYLTCE PRPKSSVNDP
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