Gene Plim_2957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2957 
Symbol 
ID9139669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3827046 
End bp3828803 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCytochrome-c oxidase 
Protein accessionYP_003630978 
Protein GI296123200 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCTG TGCATCATCA GCCGGGCTGG ATTCGTCGCT ATATATTCTC AACCGATCAT 
AAGGTGATCG GTATCCAGTT CTTATTCACG ACTCTGTTGA TGCTGATGGT TGGCGGAGCG
TTGGCTCTGG GCGTGCGCTG GCAACTGGCG TGGCCGTGGG AGCGGATGCC AATTCTGGGG
GACATGCTCT TTCGCACAGA TGGCGGGCAG ATCACTCCCG AAGCCTACAC CATGCTGTTT
ACGATGCATG CGACCGTCAT GATCTTCCTG GTGGTCATTC CCATTCTTGC GGGTGCTTTT
GGCAACTTTC TGATCCCACT GCAGATCGGT GCCGAAGATA TGGCCTTTCC GACACTCAAC
ATGTTGAGCT ACTGGTTCAT GTGGCCTGCC ATCGGCTGCT TCATGCTGTC GTTTGCTTAT
GATGGCGGCC CGGCGGCAGG CTGGACGATT TATCCAGTCC TGGCGGTCCT TCCCCAAGCT
GCTCCAGGTT CAGGCTTTGC ACAAACACTC TGGCTGTTTG GACTGACATT TGTCGGTTTC
AGCTCAATGT TCGGGTCGAT CAACTATATG ACGACCATTA TTAATATGCG TGCCCCGGGC
ATGACATTGT TCCGCATGCC GATGACGATC TGGGGAATGT TTATTACCGC AATTCTTCAG
GCATTTGCTT TGCCTGTTCT AACCGCAGCC GGTTTTATGA TGCTGGCTGA CCGCATGCTC
GGAACCACGT TCTTTATCCC GGGCGGGCTG GTTGTCAATA ACGCTCCGGC AACCGTGGGT
GGCGGACAAC CGCTGATGTG GCAGCATTTG TTCTGGTTCT ATTCGCATCC GGCTGTTTAC
ATCATGTTAC TACCAGCCAT GGGGATGGTG AGTGATATGC TGGCCTGCAT GAGCCGCAAG
CCTCTGTTTG GCTATAAGCC GATGATTTTT TCCATGGCGA CAATTGCGGG CCTGGGATTC
ATTGTCTGGG GGCACCACAT GTTTACCAGT GGGATGAACC CGATTGTCGG CATGACGTTT
ATGGTTTCGA CGATCCTGAT TGCGCTTCCA TCAGCCATCA AGACGTTCAA CTGGATTGGC
ACGATGTGGG GTGGAAAGCT CCAGTTTAAT ACGGTGCTAT TAAACTGCGC GGCTTTTGTG
TCGATGTTTA TTACCGGCGG ACTTTCGGGC ATTTTTATGG CCGCTGTCCC TGTCGATGTC
TATATCCATG ATACTTACTT TATTGTCGCT CACTTTCATT ACATCCTCTT TGGATCGACT
CTGTTCGGGA TTTTTGCGGC GATCCATTTC TGGTTTCCAA AAATGTTCGG CCGCATGATG
AGTGATCGCC TGGGGCAGAT TCACTTTTTT ATTACCTTTG CGGCTTTCAA CTGCACATTC
TTCCCCATGC ATCTGTTAGG GATTGGTGGT ATGCCCAGAA GGTATGCCGA TCCTTATCAC
TTCCCTTATC TGGAACATCT GCTGCCGCTG AATCAGTTCA TGACTTATGC GGCGATCGTG
ATGGGGTTTG CCCAGTTCAT TCTGCTGTTT AATTTTGGCT GGAGCATTTT CTTCGGCAAG
AAGTGTGGAA GAAACCCATG GAATTCGAAT GGGTTGGAGT GGCAGGCACC TTCGCCACCG
CCACATGGGA ATTTTGATGT GCAGCCTGTG GTCTATCATG GGCCTTACGA ATACAGTTCG
CCCGTATCTG GCGAGAATGA TTTTTTACCA CAGACGGAAT ACATGCCACG TCGGCCCGAT
CAGTCTCAAG GGCATTGA
 
Protein sequence
MHAVHHQPGW IRRYIFSTDH KVIGIQFLFT TLLMLMVGGA LALGVRWQLA WPWERMPILG 
DMLFRTDGGQ ITPEAYTMLF TMHATVMIFL VVIPILAGAF GNFLIPLQIG AEDMAFPTLN
MLSYWFMWPA IGCFMLSFAY DGGPAAGWTI YPVLAVLPQA APGSGFAQTL WLFGLTFVGF
SSMFGSINYM TTIINMRAPG MTLFRMPMTI WGMFITAILQ AFALPVLTAA GFMMLADRML
GTTFFIPGGL VVNNAPATVG GGQPLMWQHL FWFYSHPAVY IMLLPAMGMV SDMLACMSRK
PLFGYKPMIF SMATIAGLGF IVWGHHMFTS GMNPIVGMTF MVSTILIALP SAIKTFNWIG
TMWGGKLQFN TVLLNCAAFV SMFITGGLSG IFMAAVPVDV YIHDTYFIVA HFHYILFGST
LFGIFAAIHF WFPKMFGRMM SDRLGQIHFF ITFAAFNCTF FPMHLLGIGG MPRRYADPYH
FPYLEHLLPL NQFMTYAAIV MGFAQFILLF NFGWSIFFGK KCGRNPWNSN GLEWQAPSPP
PHGNFDVQPV VYHGPYEYSS PVSGENDFLP QTEYMPRRPD QSQGH