Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2943 |
Symbol | |
ID | 9139655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3806443 |
End bp | 3808224 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_003630964 |
Protein GI | 296123186 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCAAC TTCGTTGGCT GACTGGTCTT CTCGGCGCCT CGTCTTGTCC TGCGGGATTG CTGGAATTGG GGAGGGCAGC CATTGCCGGC TCGTTAATGA TCTCGGCAAC TCTGGGTTCT GAACCATCGG GAACCAAGTT TGATCCGACG GCTGCTGCAC TGAAGGAAAT CGCCACTTTG AAGGTGCAGG CAAAGGACTG GCCTCAGTGG GGTGGCAGCA CCTATCGCAA TAACACACCC GAGGGGAAGA ATATTCCCAC TCAGTGGGAT CTGGAATCGG GAGAAAACAT TCTCTGGGCA GCCGCGCTGG GTTCACAGAC CTACGGCAAC CCGGTGGTCG CCAACGGAAA AGTTTACGTC GGCACGAATA ACGGATATGG CTACATCAAG CGATATCCCA AGAATGTCGA TCTGGGGGCA CTCGTCTGTT TTGATGAGAA GACCGGGAAG TTTCTGTGGC AGCACAGTAA TCCCAAACTG CCCACTGGTC GTGTGCACGA CTGGCCTTTG CAGGGAGTGT GCGCTGCCGT TTACGCCGAA GGAGATAAGC TGTGGTATGT CTCCAATCGT GGAGAGGTTG TCTGCCTCGA TGCCGAAGGC TTCCACGATG GTGAAAACGA TGGGCCCTAT GTCTCAGAGC CCAACTCGAA CAAAGACGAA GCCGACATCA TCTGGCGCGT CGATATGATG GGTCAGCTGG GTGTGTCTCA GCACAATATG TGCAACTGCT CGATTACAGC CGTCGATGGT GTGATCTTCG TGAACACCTC GAATGGTGTG GATGAATCGC ACATCAACCT GCCGGCTCCC AATGCACCCA GCTTTATTGC TTTGGATCAG GCGACTGGCA AAGTCCTGTG GACGGATGAC AGTCCTGGGG CCAACATTCT GCATGGTCAG TGGTCAAGCC CCTGTCACTT TGTGCTGGAT GGTCAGGCTC AGGTGGTCTT TGGCGGTGGT GATGGCTGGG TCTATAGTTT TGATCCTAAA GGTGATGGAG CTGGCAAAGC CAAACTGCTC TGGAAGTTTG ATGCCAATCC GAAAGAGTCG CTCTATCTGC TCGGTGGACG GGCCACACGC AATCATATCA TTGCGACTCC GGTGTACTAC GATGGCTACG TGTATGTGGG TGTTGGCGAA GACCCTGAAC ATGGGGAAGG GCAGGGGCAT CTTTACTGCA TTGACCCAAA GAAACGGGGG GATGTCAGCC CGACTCTGGC ATTCGATAAA GACGGCAAGC CACTCGAAGC ACGTCGACTC CAGAATCTCG AACCGAAAAA AGGTGAGGTG GAAAAGCCGA ATCCCAACTC GGCAGTCGTT TGGCACTATG ACCAGATCGA CAAGAATGGC AACAAAAAAT TCGACTTCGA AGAGACGATG CACCGCACCT GCGGCACAGT CGCCATCAAG GACGATCTGC TCTTCGTGGC TGACTTCAGT GGTCTGTTCC ATTGCCTCGA TGCCAAGAAG GTCGACGCCA ATGGCAAGCC TGTGGTCTAC TGGGTTCACG ACATGTTTGC CGCTTCGTGG GGTTCTCCAC TGATTGTGGA AGGCCGCGTC TATATTGGCG ACGAAGATGG TGACATTTCG ATTTTCGAAC TTTCCAAAGA GATGAATCTC ATTGGCGAGA TCAATATGTC AAACGCGGTC TACTCGACGC CAGTGGTGGC AGGTGATGTG CTGTACATTG CTAACAAGTC GACATTGTTT GCCATCAAGG AAGGTGCCAA GCTTGAGGGT GGCTTCAAAG ACACCCCTCG TAACGACGAA GTGGCTGATT AA
|
Protein sequence | MTQLRWLTGL LGASSCPAGL LELGRAAIAG SLMISATLGS EPSGTKFDPT AAALKEIATL KVQAKDWPQW GGSTYRNNTP EGKNIPTQWD LESGENILWA AALGSQTYGN PVVANGKVYV GTNNGYGYIK RYPKNVDLGA LVCFDEKTGK FLWQHSNPKL PTGRVHDWPL QGVCAAVYAE GDKLWYVSNR GEVVCLDAEG FHDGENDGPY VSEPNSNKDE ADIIWRVDMM GQLGVSQHNM CNCSITAVDG VIFVNTSNGV DESHINLPAP NAPSFIALDQ ATGKVLWTDD SPGANILHGQ WSSPCHFVLD GQAQVVFGGG DGWVYSFDPK GDGAGKAKLL WKFDANPKES LYLLGGRATR NHIIATPVYY DGYVYVGVGE DPEHGEGQGH LYCIDPKKRG DVSPTLAFDK DGKPLEARRL QNLEPKKGEV EKPNPNSAVV WHYDQIDKNG NKKFDFEETM HRTCGTVAIK DDLLFVADFS GLFHCLDAKK VDANGKPVVY WVHDMFAASW GSPLIVEGRV YIGDEDGDIS IFELSKEMNL IGEINMSNAV YSTPVVAGDV LYIANKSTLF AIKEGAKLEG GFKDTPRNDE VAD
|
| |