Gene Plim_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2940 
Symbol 
ID9139652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3803019 
End bp3803669 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF1080 
Protein accessionYP_003630961 
Protein GI296123183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.221061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGCA TGACCAAGGC TCTGGGCACT CTGGCCATAC TCGCTGTGAT GTCATTCGTC 
GGCACAGCGT TTTCTGTCGC AGCCGAGACC GAAGAAGGCT TTAAGCAGCT CTTTGATGGC 
AAGTCTTTTG AAGGCTGGAA GATCAATGAG AATCCCGATA GCTGGAAGAT CGAAGATGGT 
GCGTTTGTCT GCAAAGGCAA TCGCAGCCAC CTGTTTTATG TGGGTGATGA GAAGCCCTTC 
AAGAACTTCG AATTGAAGGT CGATGTCTGG ACAGAACCGA ACAGCAATGG CGGGATCTAT 
TTCCATACGA AGTATCAGGA CACTGGCTGG CCCAAGCATG GCTTCGAGTG CCAGGTCAAC 
AACAGCTATA AGAGTGATCC ACGCAAGACT GGCAGTCTTT ATGCAGTGAA AGACGTGCTT 
GAAGCCCCCG CGAAAGATGG CGAATGGTTT ACTGAGCATG TCATCGTCAA AGACAAGCAT 
GTCGTGATCA AGGTCAACGA CAAAGTCGTC GTCGATTACA CAGAACCTGC TGATGCCAAG 
CCGGGCAAAG ATTTCACACG CGTTGTCGAT GAAGGGACTT TCGCACTCCA GGCACATGAT 
CCTGGCAGTG TGGTGCGATT TAAGAACATT CGCGTGAAGC GGCTCGACTG A
 
Protein sequence
MIRMTKALGT LAILAVMSFV GTAFSVAAET EEGFKQLFDG KSFEGWKINE NPDSWKIEDG 
AFVCKGNRSH LFYVGDEKPF KNFELKVDVW TEPNSNGGIY FHTKYQDTGW PKHGFECQVN 
NSYKSDPRKT GSLYAVKDVL EAPAKDGEWF TEHVIVKDKH VVIKVNDKVV VDYTEPADAK 
PGKDFTRVVD EGTFALQAHD PGSVVRFKNI RVKRLD